RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CCNHP51946 323 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PGGT1BP53609 377 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 RPL26P61254 145 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 USP10Q14694 798 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MYLK3Q32MK0 819 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CYB5D1Q6P9G0 228 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 KYAT3Q6YP21 454 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 DPY19L3Q6ZPD9 716 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 Q6ZVU0 165 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ETFBKMTQ8IXQ9 262 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TTC30BQ8N4P2 665 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 OR4L1Q8NH43 312 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZNF75CPQ92670 426 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 THOC1Q96FV9 657 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PLCD4Q9BRC7 762 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MAGEE1Q9HCI5 957 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 POLR3BQ9NW08 1133 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 KLHL14Q9P2G3 628 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CDH7Q9ULB5 785 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 RPL26L1Q9UNX3 145 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ERVW-1Q9UQF0 538 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 A0A0J9YYE9 177 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CD3EAPO15446 510 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TULP3O75386 442 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 NFATC1O95644 943 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TRBC1P01850 177 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MPOP05164 745 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 HOXB8P17481 243 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SAT1P21673 171 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 NCALDP61601 193 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 INSCQ1MX18 579 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 N4BP2L1Q5TBK1 243 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TANGO2Q6ICL3 276 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CLEC14AQ86T13 490 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZSWIM9Q86XI8 627 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SLC41A1Q8IVJ1 513 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PLD6Q8N2A8 252 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 GPR150Q8NGU9 434 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CYB5D2Q8WUJ1 264 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MRGPRX3Q96LB0 322 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CLEC1BQ9P126 229 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SP100P23497 879 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 IRF9Q00978 393 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MESP2Q0VG99 397 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ADAM15Q13444 863 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SEMA3AQ14563 771 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 GAB4Q2WGN9 574 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CARD16Q5EG05 197 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 C16orf46Q6P387 395 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 EID2BQ96D98 161 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MECRQ9BV79 373 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CATSPERZQ9NTU4 200 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZNF358Q9NW07 568 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZNF711Q9Y462 761 aa19.69■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PHGDHO43175 533 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 S1PR4O95977 384 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SLC35E2BP0CK96 405 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 POLD2P49005 469 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 DLX2Q07687 328 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 RBM20Q5T481 1227 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MRNIPQ6NTE8 343 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 VITQ6UXI7 678 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CEP97Q8IW35 865 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SUGP1Q8IWZ8 645 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 GPATCH11Q8N954 259 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 OR2A12Q8NGT7 310 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ECHDC3Q96DC8 303 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TUBGCP5Q96RT8 1024 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CPEB1Q9BZB8 566 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CIPCQ9C0C6 399 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZNF576Q9H609 170 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZFP14Q9HCL3 533 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TMEM216Q9P0N5 145 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SLC27A6Q9Y2P4 619 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PIKFYVEQ9Y2I7 2098 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 HMGCLP35914 325 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZNF460Q14592 562 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 RAPH1Q70E73 1250 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 LYSMD3Q7Z3D4 306 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PAF1Q8N7H5 531 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 GBP7Q8N8V2 638 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 NDNQ99608 321 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 OMDQ99983 421 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ZDHHC6Q9H6R6 413 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 MANSC1Q9H8J5 431 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ECT2Q9H8V3 914 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 BPIFA1Q9NP55 256 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 HPS4Q9NQG7 708 aa19.68■□□□□ 0.74
TNFRSF1A-201ENST00000162749 STX7O15400 261 aaKnown RBP19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PLIN3O60664 434 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TBX10O75333 385 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 POP4O95707 220 aaKnown RBP19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PRSS56P0CW18 603 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 STMN1P16949 149 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 TAS2R39P59534 338 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 RAB10P61026 200 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 IRX4P78413 519 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 FCHO2Q0JRZ9 810 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 PTPRNQ16849 979 aa19.67■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ATAT1Q5SQI0 421 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms