RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Cyp4f16Q99N17 524 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rgs10Q9CQE5 181 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rnf186Q9D241 226 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ddx59Q9DBN9 619 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Myo18aQ9JMH9 2050 aaKnown RBP18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gm4924A0A1B0GR71 966 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Top3aO70157 1003 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Yme1l1O88967 715 aaKnown RBP18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fgf18O89101 207 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mup5P11591 180 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Oas1aP11928 367 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ctnnb1Q02248 781 aaKnown RBP18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Hbq1bQ3U0A6 142 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Syce1lQ5D525 247 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cyp2c66Q5GLZ0 490 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Arhgap30Q640N3 1101 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nqo1Q64669 274 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fastkd1Q6DI86 829 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Proser3Q7TSA6 634 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ostm1Q8BGT0 338 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc44a2Q8BY89 706 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ppp4r1Q8K2V1 951 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Oas1gQ8K469 367 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tbc1d19Q8VDV7 526 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Q9D979 236 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Morf4l2Q9R0Q4 288 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mtmr7Q9Z2C9 660 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Bclaf3A2AG58 752 aaKnown RBP18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Klhl32A2AJX0 620 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 9330159F19RikD3Z623 648 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 P01740 135 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gnao1P18872 354 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 MylpfP97457 169 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Myadml2Q08AU7 307 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fut7Q11131 389 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Clec2eQ80XD9 204 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rnf168Q80XJ2 565 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 PdhxQ8BKZ9 501 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ldhal6bQ8BVP2 382 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Peli3Q8BXR6 445 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Stx5Q8K1E0 355 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 SarafQ8R3Q0 334 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nol6Q8R5K4 1152 aaKnown RBP18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Exd2Q8VEG4 650 aaKnown RBP18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pcdha11Q91Y19 950 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mcoln1Q99J21 580 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 MydgfQ9CPT4 166 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pin4Q9CWW6 131 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Upk1aQ9D132 257 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 DtnaQ9D2N4 746 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ifrd2Q9D8U0 441 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Timp4Q9JHB3 224 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tp53bp1P70399 1969 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ttll11A4Q9F4 727 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Zbed5B2RPU8 756 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Vmn2r5K7N788 911 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Vmn2r88L7N1W8 857 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Aff2O55112 1272 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Yy2Q3TTC2 378 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rabl6Q5U3K5 725 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Sema3cQ62181 751 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nod1Q8BHB0 953 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Bend5Q8C6D4 421 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mark4Q8CIP4 752 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 FgbQ8K0E8 481 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tma16Q9CR02 221 aaKnown RBP18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Chmp2aQ9DB34 222 aa18.34■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fam166bA2AIP0 273 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fam209A2APA5 170 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Kcng1A2BDX4 514 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 TertO70372 1122 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Smpd2O70572 419 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 P01668 110 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 P01878 344 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Sbk3P0C5K0 361 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Arpp19P56212 112 aaKnown RBP18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Psme3P61290 254 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr464Q5SW48 313 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 PhgdhQ61753 533 aaKnown RBP18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 RbfaQ6P3B9 350 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Znf821Q6PD05 413 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr698Q7TRN4 311 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Actr5Q80US4 605 aaKnown RBP18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Zbtb24Q80X44 710 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 4931406P16RikQ8C5X1 1059 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Parp9Q8CAS9 866 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Samd4aQ8CBY1 711 aaKnown RBP18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Acsm2Q8K0L3 575 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Smap1Q91VZ6 440 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Cybrd1Q925G2 290 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Dus2Q9D7B1 493 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Echdc3Q9D7J9 300 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Erap1Q9EQH2 930 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trpc4apQ9JLV2 797 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Atg2aQ6P4T0 1914 aa18.33■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr1145A2AVC7 325 aa18.32■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm3259D3YUK0 475 aa18.32■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fbxl18E9PYR1 771 aa18.32■□□□□ 0.52
Trim47-202ENSMUST00000106441 Chrna4O70174 629 aa18.32■□□□□ 0.52
Trim47-202ENSMUST00000106441 Per3O70361 1113 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms