RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gm42417Q8K1D0 126 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 LctlQ8K1F9 566 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slc36a1Q8K4D3 475 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 DcxrQ91X52 244 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Plpp3Q99JY8 312 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Zfp810Q99K45 461 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Isl2Q9CXV0 359 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Zfp773Q9CZ29 471 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tspan11Q9D1D1 253 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 MceeQ9D1I5 178 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tbc1d21Q9D9D3 336 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 HaghlQ9DB32 283 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Scgb2b20Q9JI02 112 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Socs6Q9JLY0 533 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Dbn1Q9QXS6 706 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Gpc1Q9QZF2 557 aa12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tet2Q4JK59 1912 aaKnown RBP12.15□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Itpripl1A2ASA8 547 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Vmn2r118E9Q1C1 853 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Atf2P16951 487 aaKnown RBP12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hnf1bP27889 558 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ptger4P32240 513 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Alox12P39655 663 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Man1a1P45700 655 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 GiprQ0P543 460 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Mcm9Q2KHI9 1134 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 PrkciQ62074 595 aaKnown RBP12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tead4Q62296 427 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Zswim9Q6DI92 447 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 DdiasQ6NZG4 898 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fez2Q6TYB5 348 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ric8bQ80XE1 520 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 AW551984Q8BGF0 804 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 CcnyQ8BGU5 341 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ankrd9Q8BH83 326 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 CyrenQ8BHZ5 157 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Snip1Q8BIZ6 383 aaKnown RBP12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gtf3c4Q8BMQ2 817 aaKnown RBP12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Slc45a3Q8K0H7 553 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Nfatc4Q8K120 901 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Plcl2Q8K394 1128 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cela1Q91X79 266 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rnf112Q96DY5 654 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Decr1Q9CQ62 335 aaKnown RBP12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dph5Q9CWQ0 281 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tchhl1Q9D3P1 638 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Capn12Q9ER56 720 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cldn19Q9ET38 224 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Vwa7Q9JHA8 891 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cldn3Q9Z0G9 219 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Col4a2P08122 1707 aa12.14□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm1110F6Y113 635 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fignl2J3QK54 644 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gsg1l2M0QWL6 290 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Best1O88870 551 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tpm3P21107 285 aaKnown RBP12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ccna2P51943 422 aaKnown RBP12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Smad1P70340 465 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gdf9Q07105 441 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Pecam1Q08481 727 aaKnown RBP12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hif3aQ0VBL6 662 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Prss38Q3UKY7 322 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Psg28Q4KL66 472 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fut10Q5F2L2 481 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cct6bQ61390 531 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sf1Q64213 653 aaKnown RBP12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cyp1b1Q64429 543 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Inpp4bQ6P1Y8 924 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 SugctQ7TNE1 436 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ldoc1Q7TPY9 151 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hfe2Q7TQ32 420 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Znf451Q8C0P7 1056 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Uba6Q8C7R4 1053 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Slc5a11Q8K0E3 673 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rpusd1Q8VCZ8 306 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cdhr1Q8VHP6 859 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Zmynd10Q99ML0 440 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sytl1Q99N80 567 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Pla2g12aQ9EPR2 192 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 PnckQ9QYK9 343 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sdk2Q6V4S5 2176 aa12.13□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Chrna4O70174 629 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tgfbr3O88393 850 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tnfrsf17O88472 185 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dll3O88516 592 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 P01641 117 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 KitP05532 979 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Egr1P08046 533 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Anxa6P14824 673 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ckmt1P30275 418 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Traf2P39429 501 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 ThraP63058 492 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Clec4fP70194 548 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dlx5P70396 289 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Frg1P97376 258 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Eif2ak2Q03963 515 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Caprin2Q05A80 1031 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Msto1Q2YDW2 556 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Uri1Q3TLD5 531 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Q3TTL0 348 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms