RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cdh6P97326 790 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cry1P97784 606 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mrpl10Q3TBW2 262 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam35aQ3UEN2 891 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zfp560Q3URI6 754 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Plcl1Q3USB7 1096 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pla2g4dQ50L43 825 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Arhgef15Q5FWH6 849 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr318Q5NCD7 306 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ctc1Q5SUQ9 1212 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ints6Q6PCM2 883 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ntrk3Q6VNS1 825 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tas2r102Q7M717 329 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam124bQ8BLQ0 456 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Q8BZE1 841 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Afap1l1Q8BZI0 768 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dock8Q8C147 2100 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcyox1lQ8C7K6 495 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fem1cQ8CEF1 617 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Asz1Q8VD46 475 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PlvapQ91VC4 438 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 KlbQ99N32 1043 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dcp2Q9CYC6 422 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Thumpd2Q9CZB3 528 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Det1Q9D0A0 550 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Polr3hQ9D2C6 204 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CabyrQ9D424 453 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PlekQ9JHK5 350 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Angptl2Q9R045 493 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gvin1Q80SU7 2427 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AcacaQ5SWU9 2345 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sec14l1A8Y5H7 715 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm13285B1AYI3 182 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm13275B1AYI8 182 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vmn2r84D3YWE3 849 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm2897K7N6T7 172 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nthl1O35980 300 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Kcnn4O89109 425 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AfpP02772 605 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cxcr2P35343 359 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lhx3P50481 400 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gpc4P51655 557 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atp13a5Q3TYU2 1216 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ulk3Q3U3Q1 472 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PfplQ5RKV8 702 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cox8aQ64445 69 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 DgkqQ6P5E8 934 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nudcd1Q6PIP5 582 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 IfnzQ8BQT1 182 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem74Q8BQU7 305 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccdc187Q8C5V8 958 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm13278Q8CD73 182 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hectd2Q8CDU6 774 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ppp1r14cQ8R4S0 164 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Slc25a3Q8VEM8 357 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam3cQ91VU0 227 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lpin1Q91ZP3 924 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Reep3Q99KK1 254 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rabl3Q9D4V7 236 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 DynapQ9D7M5 161 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rnf4Q9QZS2 194 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Deaf1Q9Z1T5 566 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dio2Q9Z1Y9 266 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Serpinb3cA2RSF9 386 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm4871D3Z0W7 314 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm4450E9Q007 373 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Srsf11E9Q6E5 511 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Morc3F7BJB9 942 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 EsrraO08580 422 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CtssO70370 340 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rasgrf2P70392 1189 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pla2g5P97391 137 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hsd3b4Q61767 373 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cdc14bQ6PFY9 485 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gcfc2Q8BKT3 769 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Washc5Q8C2E7 1159 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ssx2ipQ8VC66 615 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trim60Q8VI40 466 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Chchd6Q91VN4 273 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AslQ91YI0 464 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam69bQ99ML4 431 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mrpl17Q9D8P4 176 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vwa7Q9JHA8 891 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 IvdQ9JHI5 424 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pkp3Q9QY23 797 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Chrna6Q9R0W9 494 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nup210lQ9D2F7 1881 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Igkv5-43A0A0B4J1J2 115 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adgrf2E9Q4J9 644 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Polr2lP62876 67 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 SgcgP82348 291 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam131bQ3TY60 332 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tstd2Q3U269 495 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lsg1Q3UM18 644 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Clec12aQ504P2 267 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Klra3Q64329 266 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pja2Q80U04 707 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 C2cd2lQ80X80 706 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ubp1Q811S7 540 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dyrk4Q8BI55 632 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms