RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Dlg3P70175 849 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm29609Q3UU56 907 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Msi1Q61474 362 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 CochQ62507 552 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pfkfb4Q6DTY7 469 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fndc11Q80WB0 326 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lrrc27Q80YS5 523 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gtf3c2Q8BL74 907 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Elmo1Q8BPU7 727 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Usp43Q8BUM9 1132 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Hectd2Q8CDU6 774 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 BroxQ8K2Q7 411 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 MpstQ99J99 297 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Dctn2Q99KJ8 402 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Wdsub1Q9D0I6 474 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gsdmdc1Q9D8T2 487 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc25a19Q9DAM5 318 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 PigqQ9QYT7 581 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Col2a1P28481 1487 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 CtcflA2APF3 636 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Clca3bE9PUL3 1044 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr731F8VQB9 326 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Dnal1Q05A62 190 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tgm3Q08189 693 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Itga7Q61738 1179 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 AW551984Q8BGF0 804 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Smad3Q8BUN5 425 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gpat3Q8C0N2 438 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mrpl58Q8R035 206 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 CtbsQ8R242 366 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 ScgnQ91WD9 276 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Use1Q9CQ56 270 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Agpat3Q9D517 376 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc13a2Q9ES88 586 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm28363A0A087WQW2 129 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc4a11A2AJN7 862 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm3164L7N2B9 238 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm3264L7N2C5 238 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Got2P05202 430 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 TpbpaP13438 124 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pdap1Q3UHX2 181 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 BtrcQ3ULA2 605 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cep44Q5HZK1 386 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Nomo1Q6GQT9 1214 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ccdc85bQ6PDY0 202 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Arhgap12Q8C0D4 838 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 DhddsQ99KU1 333 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fam45aQ9D8N2 357 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cmtm7Q9ESD6 167 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rasgrp2Q9QUG9 608 aa10.31□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Scrg1O88745 98 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Kcnn4O89109 425 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 AladP10518 330 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lamp2P17047 415 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Abl2Q4JIM5 1182 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Adora2bQ60614 332 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Atp11bQ6DFW5 1175 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Klhl23Q6GQU2 558 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Scube1Q6NZL8 1018 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 GnasQ6R0H7 1133 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Phf21aQ6ZPK0 659 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gtf2a2Q80ZM7 109 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Serpinb9dQ8BMT0 377 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc43a1Q8BSM7 564 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 NaprtQ8CC86 538 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cyp2d26Q8CIM7 500 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cdhr5Q8VHF2 831 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cxxc5Q91WA4 317 aaKnown RBP10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pcdhb6Q91XZ4 772 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Arpc2Q9CVB6 300 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Trim13Q9CYB0 407 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 PirQ9D711 290 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mrgpra2aA0A0R4J1Z0 331 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr564E9PWA8 316 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mfsd4b4J3QNS5 503 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 GzmgP13366 248 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Nedd8P29595 81 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gabrr2P56476 465 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Magee2Q52KG3 523 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc6a3Q61327 619 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vsx2Q61412 361 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sh3rf1Q69ZI1 892 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 D3Ertd751eQ8BGN2 192 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 IvdQ9JHI5 424 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tsga10ipF7A1F0 157 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Grpel2O88396 224 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 FpgsP48760 587 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Atp5jP97450 108 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tssk1bQ61241 365 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr792Q7TRH9 311 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr297Q7TS07 310 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Plin5Q8BVZ1 463 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Trpv3Q8K424 791 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Colec12Q8K4Q8 742 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ces2aQ8QZR3 558 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Akr1c13Q8VC28 323 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Kctd5Q8VC57 234 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr665Q8VG79 316 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mgrn1Q9D074 532 aa10.3□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Prorsd1Q9D820 169 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms