RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MDGA1Q8NFP4 955 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 UBLCP1Q8WVY7 318 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-230ENST00000641927 CAVIN3Q969G5 261 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.4
PHGDH-230ENST00000641927 SEMA4AQ9H3S1 761 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 TRABDQ9H4I3 376 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 SOX13Q9UN79 622 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 ITM2BQ9Y287 266 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 PPIL1Q9Y3C6 166 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 RPS6KL1Q9Y6S9 549 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 ALDH1A2O94788 518 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 ACSL3O95573 720 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 POLBP06746 335 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 DRD3P35462 400 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 ZBTB16Q05516 673 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 LAMB3Q13751 1172 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 TAF1AQ15573 450 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-230ENST00000641927 CWF19L1Q69YN2 538 aaKnown RBP17.52■□□□□ 0.39
PHGDH-230ENST00000641927 TSPAN33Q86UF1 283 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 MCCC1Q96RQ3 725 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-230ENST00000641927 RANBP9Q96S59 729 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 NAT9Q9BTE0 207 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 KIFC1Q9BW19 673 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 VPS37BQ9H9H4 285 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 ZFYVE1Q9HBF4 777 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 SERGEFQ9UGK8 458 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 SCML1Q9UN30 329 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 NCKAP1Q9Y2A7 1128 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 KCTD3Q9Y597 815 aa17.52■□□□□ 0.39
PHGDH-230ENST00000641927 MUC3AQ02505 3323 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 TMEM221A6NGB7 291 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 M0R296 226 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 CLDN7O95471 211 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 VIPR1P32241 457 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 TMPRSS15P98073 1019 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 ELP6Q0PNE2 266 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 PIP5KL1Q5T9C9 394 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 LRRC66Q68CR7 880 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 FBXO38Q6PIJ6 1188 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 CRTC1Q6UUV9 634 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 FAM124AQ86V42 546 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 PTCD2Q8WV60 388 aaKnown RBP17.51■□□□□ 0.39
PHGDH-230ENST00000641927 PBXIP1Q96AQ6 731 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 ZNF669Q96BR6 464 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-230ENST00000641927 ZNF778Q96MU6 729 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 TTC25Q96NG3 672 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 LYSMD1Q96S90 227 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 WRAP53Q9BUR4 548 aaKnown RBP17.51■□□□□ 0.39
PHGDH-230ENST00000641927 ARFGAP3Q9NP61 516 aa17.51■□□□□ 0.39
PHGDH-230ENST00000641927 MYLKQ15746 1914 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 FAM237BA0A1B0GVD1 139 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 GOLGA8CPA6NN73 597 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 LDB2O43679 373 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 PI15O43692 258 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 H2AFXP16104 143 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 LPOP22079 712 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 NMBRP28336 390 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 SSTR1P30872 391 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 SUOXP51687 545 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 PDE1BQ01064 536 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 SFSWAPQ12872 951 aaKnown RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 CBLBQ13191 982 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 PTPRCAPQ14761 206 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 AGBL4Q5VU57 503 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 UNC5AQ6ZN44 842 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 C3orf62Q6ZUJ4 267 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 DPPA4Q7L190 304 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 NLRP9Q7RTR0 991 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 HNRNPLLQ8WVV9 542 aaKnown RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 RAB7BQ96AH8 199 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 MFSD3Q96ES6 412 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 TXLNGYQ9BZA5 131 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 LRRC4CQ9HCJ2 640 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 BPIFA1Q9NP55 256 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 SLC2A6Q9UGQ3 507 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 GGT7Q9UJ14 662 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 FNDC3AQ9Y2H6 1198 aaKnown RBP17.5■□□□□ 0.39
PHGDH-230ENST00000641927 PKP3Q9Y446 797 aa17.5■□□□□ 0.39
PHGDH-230ENST00000641927 MROH6A6NGR9 719 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 STX7O15400 261 aaKnown RBP17.49■□□□□ 0.39
PHGDH-230ENST00000641927 USP1O94782 785 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 TTC4O95801 387 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 LHCGRP22888 699 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 MMP12P39900 470 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
PHGDH-230ENST00000641927 SKIDA1Q1XH10 827 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 TSTD2Q5T7W7 516 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 OR4K2Q8NGD2 314 aa17.49■□□□□ 0.39
PHGDH-230ENST00000641927 MRM3Q9HC36 420 aaKnown RBP17.49■□□□□ 0.39
PHGDH-230ENST00000641927 CCL22O00626 93 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PCDH8O95206 1070 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ELFN1P0C7U0 828 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 HMGCLP35914 325 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 CRYMQ14894 314 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms