RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 OR13H1Q8NG92 308 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 OR14C36Q8NHC7 312 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 EXD1Q8NHP7 514 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 RNF157Q96PX1 679 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ALS2CR12Q96Q35 445 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ATP13A1Q9HD20 1204 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 NCKAP1Q9Y2A7 1128 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 EME2A4GXA9 379 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 MIF4GDA9UHW6 222 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PRAMEF26H0Y7S4 382 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 DFFAO00273 331 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SCAMP1O15126 338 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 FFAR2O15552 330 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SLC7A4O43246 635 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SMAD6O43541 496 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 CD160O95971 181 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 MT-CO1P00395 513 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 THEGLP0DJG4 465 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PYGMP11217 842 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PECAM1P16284 738 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PTPN7P35236 360 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 NUDT1P36639 197 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SERPINH1P50454 418 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PAPOLAP51003 745 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 DUSP3P51452 185 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 NDST2P52849 883 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 OXCT1P55809 520 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 ECT2LQ008S8 904 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SLC10A2Q12908 348 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SERINC3Q13530 473 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SLC12A1Q13621 1099 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 FZD2Q14332 565 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 CLCA4Q14CN2 919 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 POLD3Q15054 466 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PAFAH1B3Q15102 231 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 TGIF1Q15583 401 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PPP2R5EQ16537 467 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF284Q2VY69 593 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PARP15Q460N3 678 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 TFDP3Q5H9I0 405 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 XKR5Q6UX68 686 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 NPNTQ6UXI9 565 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 CCDC81Q6ZN84 652 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 ATG14Q6ZNE5 492 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 VSIG1Q86XK7 387 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 RFX6Q8HWS3 928 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 CCDC50Q8IVM0 306 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 MAP7D3Q8IWC1 876 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 TRIM58Q8NG06 486 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 IFI44Q8TCB0 444 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 LRRN4Q8WUT4 740 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 EXTL1Q92935 676 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 RBM41Q96IZ5 413 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 RPL10LQ96L21 214 aaKnown RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 BMFQ96LC9 184 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 CCNL2Q96S94 520 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 KLF6Q99612 283 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 OMDQ99983 421 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SPON2Q9BUD6 331 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 C2orf49Q9BVC5 232 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-225ENST00000641720 HEMGNQ9BXL5 484 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 TLR10Q9BXR5 811 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 SLC39A8Q9C0K1 460 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 MAGEH1Q9H213 219 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PDFQ9HBH1 243 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 WDR70Q9NW82 654 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 PPM1HQ9ULR3 514 aa7.48□□□□□ -1.21
PHGDH-225ENST00000641720 NF1P21359 2839 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 DCHS2Q6V1P9 2916 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 TCRBV7S2A1N4TA0A589 114 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 J3KR12 359 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SPINT1O43278 529 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ATP9BO43861 1147 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 PRAMEF11O60813 436 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RNGTTO60942 597 aaKnown RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ZRANB2O95218 330 aaKnown RBP eCLIP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 PEX11BO96011 259 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ATP1A1P05023 1023 aaKnown RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ITGB2P05107 769 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ITGA2BP08514 1039 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SRCP12931 536 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 NME1P15531 152 aaKnown RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 PRLRP16471 622 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ETFBP38117 255 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ARSDP51689 593 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RWDD2BP57060 319 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 YBEYP58557 167 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 DAB2P98082 770 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 TLE1Q04724 770 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 GALNT2Q10471 571 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RPS6KA1Q15418 735 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms