RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 FNDC3AQ9Y2H6 1198 aaKnown RBP16.87■□□□□ 0.29
PHGDH-223ENST00000641597 SCN4AP35499 1836 aa16.87■□□□□ 0.29
PHGDH-223ENST00000641597 C7orf72A4D263 438 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 UBXN8O00124 270 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 RENBPP51606 427 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 DNAJB13P59910 316 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 ROR2Q01974 943 aaKnown RBP16.86■□□□□ 0.29
PHGDH-223ENST00000641597 CRHR2Q13324 411 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 OR4D1Q15615 310 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 UNC50Q53HI1 259 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 FUNDC1Q8IVP5 155 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 LPGAT1Q92604 370 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 SLCO4A1Q96BD0 722 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 SERPINB11Q96P15 392 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 MRM3Q9HC36 420 aaKnown RBP16.86■□□□□ 0.29
PHGDH-223ENST00000641597 PATJQ8NI35 1801 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 A0A0D9SEW6 157 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 GPC4O75487 556 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 TFAP2AP05549 437 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 PBX3P40426 434 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 GRB7Q14451 532 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 HERC3Q15034 1050 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 CLLU1OSQ5K130 101 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 UMODL1-AS1Q8N2C9 162 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 PTCD2Q8WV60 388 aaKnown RBP16.86■□□□□ 0.29
PHGDH-223ENST00000641597 PRPF18Q99633 342 aaKnown RBP16.86■□□□□ 0.29
PHGDH-223ENST00000641597 ZYG11BQ9C0D3 744 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 GRIP2Q9C0E4 1043 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 FAM192AQ9GZU8 254 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 LZTS1Q9Y250 596 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 BTRCQ9Y297 605 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 TLR6Q9Y2C9 796 aa16.86■□□□□ 0.29
PHGDH-223ENST00000641597 MROH6A6NGR9 719 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 GOT2P00505 430 aaKnown RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 CYBAP13498 195 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 UGT1A6P19224 532 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 INHBEP58166 350 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 PFKFB4Q16877 469 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 APLFQ8IW19 511 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 SCML4Q8N228 414 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 SLC29A1Q99808 456 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 CENPKQ9BS16 269 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 PRKD2Q9BZL6 878 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 VPS28Q9UK41 221 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 DNAJC15Q9Y5T4 150 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 CCDC162PA2VCL2 907 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF189O75820 626 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 HSPA1AP0DMV8 641 aaKnown RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 HSPA1BP0DMV9 641 aaKnown RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 CCND3P30281 292 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 CLCN5P51795 746 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 SLC7A2P52569 658 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF678Q5SXM1 525 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 SETD3Q86TU7 594 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 LCA5Q86VQ0 697 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 PTGR2Q8N8N7 351 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-223ENST00000641597 ESAMQ96AP7 390 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 BTBD9Q96Q07 612 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 COQ10BQ9H8M1 238 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 SNX13Q9Y5W8 968 aa16.85■□□□□ 0.29
PHGDH-223ENST00000641597 TRIM38O00635 465 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MRASO14807 208 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CDKN1CP49918 316 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 APLP1P51693 650 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 XIAPP98170 497 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 TRIM25Q14258 630 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CAPRIN1Q14444 709 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MAPRE1Q15691 268 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MTX3Q5HYI7 312 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 C6orf10Q5SRN2 563 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 KLC3Q6P597 504 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MON1AQ86VX9 555 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 RASAL3Q86YV0 1011 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NUP93Q8N1F7 819 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MARVELD2Q8N4S9 558 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 DCBLD1Q8N8Z6 715 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CCSER2Q9H7U1 834 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 AKTIPQ9H8T0 292 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CKMT2P17540 419 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 OR1E1P30953 314 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 KCNQ1P51787 676 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 HK2P52789 917 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 POLD3Q15054 466 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ACAP2Q15057 778 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 UGT3A2Q3SY77 523 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 VPS26BQ4G0F5 336 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 C10orf120Q5SQS8 335 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 KIAA0408Q6ZU52 694 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 LARP4Q71RC2 724 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■□□□□ 11.3
PHGDH-223ENST00000641597 ZNF598Q86UK7 904 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 TTC16Q8NEE8 873 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 EME1Q96AY2 570 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CIB1Q99828 191 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms