RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CDKN3Q16667 212 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 QPCTQ16769 361 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 CRTC1Q6UUV9 634 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 RFLNAQ6ZTI6 216 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 HSD11B1LQ7Z5J1 315 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 PELI3Q8N2H9 469 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 GDF3Q9NR23 364 aa26.77■■□□□ 1.88
VEGFA-231ENST00000640499 CNOT1A5YKK6 2376 aaKnown RBP26.76■■□□□ 1.87
VEGFA-231ENST00000640499 A6NNZ2 444 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 LZTS3O60299 673 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-231ENST00000640499 ELFN1P0C7U0 828 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 RXRGP48443 463 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 IL9RQ01113 521 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 KDELC1Q6UW63 502 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 PLA2G15Q8NCC3 412 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 LPCAT1Q8NF37 534 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 TRIM58Q8NG06 486 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 CAMK1GQ96NX5 476 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 VAT1Q99536 393 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 GORASP1Q9BQQ3 440 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 UBP1Q9NZI7 540 aa26.76■■□□□ 1.87
VEGFA-231ENST00000640499 GIPC1O14908 333 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PTMAP06454 111 aaKnown RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 RPL26P61254 145 aaKnown RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 FZD2Q14332 565 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 LRRC14Q15048 493 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PID1Q7Z2X4 250 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PTAR1Q7Z6K3 402 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 SLC13A5Q86YT5 568 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 SLC35B2Q8TB61 432 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 FAM174AQ8TBP5 190 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 ANP32BQ92688 251 aaKnown RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 OXNAD1Q96HP4 312 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 ALS2CR12Q96Q35 445 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 FCRL5Q96RD9 977 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 KLHL8Q9P2G9 620 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PNMA8BQ9ULN7 279 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 RPL26L1Q9UNX3 145 aaKnown RBP26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PCDHGB2Q9Y5G2 931 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 PCNX2A6NKB5 2137 aa26.75■■□□□ 1.87
VEGFA-231ENST00000640499 CAPN8A6NHC0 703 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 F5H423 210 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-231ENST00000640499 SH3BP5O60239 455 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 CYP2A6P11509 494 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-231ENST00000640499 PTSQ03393 145 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 BNIP3Q12983 259 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 GALNT3Q14435 633 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 SLC14A2Q15849 920 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 DARS2Q6PI48 645 aaKnown RBP26.74■■□□□ 1.87
VEGFA-231ENST00000640499 NYAP1Q6ZVC0 841 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 USP45Q70EL2 814 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 KANSL1Q7Z3B3 1105 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 KDELC2Q7Z4H8 507 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 CDKL3Q8IVW4 592 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-231ENST00000640499 FUBP1Q96AE4 644 aaKnown RBP26.74■■□□□ 1.87
VEGFA-231ENST00000640499 LYSMD1Q96S90 227 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 CARD9Q9H257 536 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 TRHDEQ9UKU6 1024 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 BTBD3Q9Y2F9 522 aa26.74■■□□□ 1.87
VEGFA-231ENST00000640499 ANKRD66B4E2M5 251 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 PCDHGA12O60330 932 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 DFNA5O60443 496 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 MAGEC1O60732 1142 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 RABIFP47224 123 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 PCSK7Q16549 785 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 LRRC66Q68CR7 880 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 TECPR1Q7Z6L1 1165 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 TTC13Q8NBP0 860 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 DEFB124Q8NES8 71 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 SAP25Q8TEE9 199 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 C1QTNF7Q9BXJ2 289 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 KLF15Q9UIH9 416 aa26.73■■□□□ 1.87
VEGFA-231ENST00000640499 CACNA1AO00555 2505 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 SPTY2D1-AS1A0A0U1RR47 76 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 KCNN4O15554 427 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 CBFA2T3O75081 653 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 PMPCBO75439 489 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 KCNK5O95279 499 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 C1SP09871 688 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 CSRP1P21291 193 aaKnown RBP26.72■■□□□ 1.87
VEGFA-231ENST00000640499 CA4P22748 312 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 ETV3P41162 512 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 CCT8P50990 548 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 EPHB1P54762 984 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 CDK18Q07002 472 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 INPP5AQ14642 412 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 ACOX1Q15067 660 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 SIX1Q15475 284 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-231ENST00000640499 DENND2CQ68D51 928 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 Q6ZVL8 140 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 GATAD2AQ86YP4 633 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 DCP2Q8IU60 420 aaKnown RBP26.72■■□□□ 1.87
VEGFA-231ENST00000640499 ATG4AQ8WYN0 398 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 EID2BQ96D98 161 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 TRMT1Q9NXH9 659 aaKnown RBP26.72■■□□□ 1.87
VEGFA-231ENST00000640499 DNPEPQ9ULA0 475 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 PYCARDQ9ULZ3 195 aa26.72■■□□□ 1.87
VEGFA-231ENST00000640499 LOC285095A0A1B0GVY8 99 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 GOLGA6L9A6NEM1 432 aa26.71■■□□□ 1.87
VEGFA-231ENST00000640499 USP27XA6NNY8 438 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms