RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ANKRD18AQ8IVF6 992 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 MIGA1Q8NAN2 632 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 SH3KBP1Q96B97 665 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 SCLT1Q96NL6 688 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 TWNKQ96RR1 684 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 MROH8Q9H579 483 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 MYH16Q9H6N6 1097 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 WDR6Q9NNW5 1121 aaKnown RBP3.35□□□□□ -1.87
ATM-230ENST00000640388 RIC8AQ9NPQ8 531 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 ENTPD7Q9NQZ7 604 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 ZNF580Q9UK33 172 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 CNPY2Q9Y2B0 182 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 CLDN16Q9Y5I7 305 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 SRPRBQ9Y5M8 271 aaKnown RBP3.35□□□□□ -1.87
ATM-230ENST00000640388 NCOR2Q9Y618 2525 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 INSRP06213 1382 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 ANKRD30BQ9BXX2 1392 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 ASPMQ8IZT6 3477 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 FER1L6Q2WGJ9 1857 aa3.35□□□□□ -1.87
ATM-230ENST00000640388 PPLO60437 1756 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 LOC102724159A0A0B4J2E5 919 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 SH2D7A6NKC9 451 aaPredicted RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 GTPBP1O00178 669 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 ASAP2O43150 1006 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 TPD52L2O43399 206 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 ITM2AO43736 263 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 SLC28A2O43868 658 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 EIF3JO75822 258 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 CHRM4P08173 479 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 CKMT1AP12532 417 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 NAGAP17050 411 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 TNFRSF8P28908 595 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 CCKBRP32239 447 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 GPR12P47775 334 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 ARSFP54793 590 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 ZXDBP98169 803 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 LTBQ06643 244 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 TBL3Q12788 808 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 NAA25Q14CX7 972 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 PWP2Q15269 919 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 NCAPH2Q6IBW4 605 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 IL20RBQ6UXL0 311 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 FAM83HQ6ZRV2 1179 aaPredicted RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 SMC5Q8IY18 1101 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 RBFAQ8N0V3 343 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 TEX45Q8NA69 505 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 ELP5Q8TE02 316 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 TBC1D22AQ8WUA7 517 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 ADAMTS14Q8WXS8 1223 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 CNOT9Q92600 299 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 TMEM18Q96B42 140 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 PSMD1Q99460 953 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 CD180Q99467 661 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 CDX2Q99626 313 aaPredicted RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 HNRNPABQ99729 332 aaKnown RBP3.34□□□□□ -1.87
ATM-230ENST00000640388 CLSTN3Q9BQT9 956 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 REEP2Q9BRK0 252 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.34□□□□□ -1.87
ATM-230ENST00000640388 SEZ6LQ9BYH1 1024 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 NPFFR1Q9GZQ6 430 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 LMAN2LQ9H0V9 348 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 SLC32A1Q9H598 525 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 MVB12BQ9H7P6 319 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 ALKBH4Q9NXW9 302 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 IL36RNQ9UBH0 155 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 RAI2Q9Y5P3 530 aa3.34□□□□□ -1.87
ATM-230ENST00000640388 BPTFQ12830 3046 aa3.34□□□□□ -1.88
ATM-230ENST00000640388 COL2A1P02458 1487 aaPredicted RBP3.34□□□□□ -1.88
ATM-230ENST00000640388 FAM90A7PA6NKC0 464 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 FAM90A22PA8MWA6 464 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 FAM90A12PA8MX19 464 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 FAM90A23PA8MXZ1 464 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 KDM4EB2RXH2 506 aaPredicted RBP3.33□□□□□ -1.88
ATM-230ENST00000640388 EIF3FO00303 357 aaPredicted RBP3.33□□□□□ -1.88
ATM-230ENST00000640388 PER2O15055 1255 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 TSPAN3O60637 253 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 MMP10P09238 476 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 NUDT6P53370 316 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 UBE3AQ05086 875 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 EGR4Q05215 589 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 SLC18A2Q05940 514 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 DSC1Q08554 894 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 CAPSQ13938 189 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 MYBPC2Q14324 1141 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 TAF12Q16514 161 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 EDRF1Q3B7T1 1238 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 FAM109BQ6ICB4 259 aaPredicted RBP3.33□□□□□ -1.88
ATM-230ENST00000640388 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 PRSS45Q7RTY3 260 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.33□□□□□ -1.88
ATM-230ENST00000640388 CHD1LQ86WJ1 897 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 SPATA2LQ8IUW3 424 aaPredicted RBP3.33□□□□□ -1.88
ATM-230ENST00000640388 TMEM163Q8TC26 289 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 GPT2Q8TD30 523 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 GDPD5Q8WTR4 605 aa3.33□□□□□ -1.88
ATM-230ENST00000640388 RAB40AQ8WXH6 277 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms