RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 FOXL2NBQ6ZUU3 175 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 SLC9B2Q86UD5 537 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 TMTC1Q8IUR5 882 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 SLC35F3Q8IY50 421 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 ZCCHC9Q8N567 271 aaKnown RBP4.8□□□□□ -1.64
CCDC7-216ENST00000640058 ANKRD42Q8N9B4 389 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 IL17RCQ8NAC3 791 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 HES6Q96HZ4 224 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 HERPUD2Q9BSE4 406 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 MAGEE1Q9HCI5 957 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC7-216ENST00000640058 FAM96BQ9Y3D0 163 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 ZNF711Q9Y462 761 aa4.8□□□□□ -1.64
CCDC7-216ENST00000640058 TEX22C9J3V5 150 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 RFPL2O75678 378 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 MMP2P08253 660 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 CD58P19256 250 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 RELQ04864 619 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-216ENST00000640058 PPFIA1Q13136 1202 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 PPP2R5BQ15173 497 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 CTF1Q16619 201 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 SLC36A4Q6YBV0 504 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 FOXRED2Q8IWF2 684 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 AGBL3Q8NEM8 1001 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 LRRC8CQ8TDW0 803 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 TTC14Q96N46 770 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 MPHOSPH8Q99549 860 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 CSTL1Q9H114 145 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 MMP28Q9H239 520 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 BPIFA1Q9NP55 256 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 C20orf141Q9NUB4 165 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
CCDC7-216ENST00000640058 CNOT7Q9UIV1 285 aaKnown RBP4.79□□□□□ -1.64
CCDC7-216ENST00000640058 LSM4Q9Y4Z0 139 aaKnown RBP4.79□□□□□ -1.64
CCDC7-216ENST00000640058 HEXAP06865 529 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 AGAP20933 346 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 CNTFP26441 200 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 GGT5P36269 586 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 TAF12Q16514 161 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 TCTN1Q2MV58 587 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 ZNF766Q5HY98 468 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 IRAK1BP1Q5VVH5 260 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 HIST2H2BCQ6DN03 193 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 HIST2H2BDQ6DRA6 164 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 MTSS1LQ765P7 747 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 LRRC8DQ7L1W4 858 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 LRRTM4Q86VH4 590 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 BBS10Q8TAM1 723 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 HERVK_113Q902F9 699 aa4.78□□□□□ -1.64
CCDC7-216ENST00000640058 ESRP2Q9H6T0 727 aaKnown RBP4.78□□□□□ -1.64
CCDC7-216ENST00000640058 CGNL1Q0VF96 1302 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 TEX13CA0A0J9YWL9 993 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 GOLGA6L10A0A0M3HER8 536 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 C16orf97H3BN30 126 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 MT-CYBP00156 380 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 ATP1A1P05023 1023 aaKnown RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 CETPP11597 493 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 PSMC2P35998 433 aaKnown RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 RGMBQ6NW40 437 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 FAM122CQ6P4D5 195 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 ZNF449Q6P9G9 518 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 TAOK1Q7L7X3 1001 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 TRMT1LQ7Z2T5 733 aaKnown RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 CIARTQ8N365 385 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 ZBTB2Q8N680 514 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 KCNH5Q8NCM2 988 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 C11orf65Q8NCR3 313 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 OR13A1Q8NGR1 328 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 LNX1Q8TBB1 728 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 NOC3LQ8WTT2 800 aaKnown RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 GPR63Q9BZJ6 419 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 MKKSQ9NPJ1 570 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 BEX4Q9NWD9 120 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-216ENST00000640058 ADAM18Q9Y3Q7 739 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 STON1Q9Y6Q2 735 aa4.77□□□□□ -1.65
CCDC7-216ENST00000640058 PDS5AQ29RF7 1337 aaKnown RBP4.76□□□□□ -1.65
CCDC7-216ENST00000640058 TMEM202A6NGA9 273 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 GUCY1B2O75343 617 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 CDH1P12830 882 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 HLA-DOBP13765 273 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 SHMT1P34896 483 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 DDIT3P35638 169 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 TMPOP42166 694 aaKnown RBP4.76□□□□□ -1.65
CCDC7-216ENST00000640058 PHEXP78562 749 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 C2orf68Q2NKX9 166 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 SLC45A4Q5BKX6 768 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 CPLX2Q6PUV4 134 aaKnown RBP4.76□□□□□ -1.65
CCDC7-216ENST00000640058 ANKRD18AQ8IVF6 992 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 BEST2Q8NFU1 509 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 DUSP19Q8WTR2 217 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 SLC20A1Q8WUM9 679 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 TKTL2Q9H0I9 626 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 GPR108Q9NPR9 543 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 ZFP57Q9NU63 452 aa4.76□□□□□ -1.65
CCDC7-216ENST00000640058 FBXO9Q9UK97 447 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms