RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 MAPK7Q13164 816 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 USF2Q15853 346 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FOXRED2Q8IWF2 684 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 BPIFCQ8NFQ6 507 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF671Q8TAW3 534 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NINJ1Q92982 152 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PDXPQ96GD0 296 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TRIM9Q9C026 710 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 REXO4Q9GZR2 422 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RIMS4Q9H426 269 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RANBP3Q9H6Z4 567 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MCCC2Q9HCC0 563 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TRPC4Q9UBN4 977 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NDUFAF1Q9Y375 327 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGAP42A6NI28 874 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TRIM77I1YAP6 450 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CDC7O00311 574 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PRDM1O75626 825 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PRAMEF12O95522 483 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TOP3BO95985 862 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 HSPD1P10809 573 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CDH1P12830 882 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 IFI30P13284 250 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 GNAZP19086 355 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TAGLN2P37802 199 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MAPK10P53779 464 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CYP27A1Q02318 531 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PUM1Q14671 1186 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUSP7Q16829 419 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PRAMEF20Q5VT98 475 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SGMS1Q86VZ5 419 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DEPDC4Q8N2C3 294 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 C19orf18Q8NEA5 215 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FAM193BQ96PV7 902 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 GAL3ST2Q9H3Q3 398 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CERS4Q9HA82 394 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PRDM9Q9NQV7 894 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PPP4R1LQ9P1A2 415 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RNF215Q9Y6U7 377 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 EPRSP07814 1512 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FANCD2Q9BXW9 1451 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 KDM6AO15550 1401 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 YTHDC2Q9H6S0 1430 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 A0A0U1RQJ8 604 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TUBAL3A6NHL2 446 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TTLL8A6PVC2 850 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PPP1R3GB7ZBB8 358 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 I3L521 148 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SLC31A2O15432 143 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 HS6ST1O60243 411 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NR2C1P13056 603 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 AMPD1P23109 780 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SUCLG1P53597 346 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 EMP3P54852 163 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SELENOVP59797 346 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PRPF39Q86UA1 669 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PDPRQ8NCN5 879 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SPATA20Q8TB22 786 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SLC5A11Q8WWX8 675 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SRA1Q9HD15 236 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGEF3Q9NR81 526 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1B0GW55 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SAGE2PA6NJ88 616 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ERVV-1B6SEH8 477 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 IPO13O94829 963 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM63AO94886 807 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FAM153BP0C7A2 387 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L2P0CJ85 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L3P0CJ86 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L4P0CJ87 422 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L5P0CJ88 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L6P0CJ89 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4L7P0CJ90 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FBLN1P23142 703 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CD1BP29016 333 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MECP2P51608 486 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FOXO4P98177 505 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FASTKD1Q53R41 847 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF311Q5JNZ3 666 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PLEKHH3Q7Z736 793 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TMC8Q8IU68 726 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PAPD5Q8NDF8 572 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 OR13C3Q8NGS6 347 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CCDC120Q96HB5 630 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 JPH4Q96JJ6 628 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 LRRC37BQ96QE4 947 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SPON2Q9BUD6 331 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CEP41Q9BYV8 373 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SEMA4CQ9C0C4 833 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SPON1Q9HCB6 807 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ACTR10Q9NZ32 417 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUX4Q9UBX2 424 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 OGDHLQ9ULD0 1010 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CLDN4O14493 209 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FSCN2O14926 492 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 EIF1BO60739 113 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SLC2A1P11166 492 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms