RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GPATCH1Q9BRR8 931 aaKnown RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 NPLQ9BXD5 320 aaPredicted RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 AKTIPQ9H8T0 292 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MRM3Q9HC36 420 aaKnown RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 VTA1Q9NP79 307 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 FAIMQ9NVQ4 179 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ZNHIT2Q9UHR6 403 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 IPPQ9Y573 584 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 HHLA1C9JL84 531 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CCL22O00626 93 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PPP6CO00743 305 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 TFPTP0C1Z6 253 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ACADVLP49748 655 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SLC5A3P53794 718 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF678Q5SXM1 525 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 GPR158Q5T848 1215 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 HECTD2Q5U5R9 776 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 TMEM207Q6UWW9 146 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 Q6ZNX1 250 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 LYSMD3Q7Z3D4 306 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CROCCP3Q8IVE0 287 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SLC15A3Q8IY34 581 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CMTR2Q8IYT2 770 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 OFCC1Q8IZS5 231 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PACRGLQ8N7B6 248 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZUFSPQ96AP4 578 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 RPL10LQ96L21 214 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 AGPAT4Q9NRZ5 378 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 RBM22Q9NW64 420 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 DSEQ9UL01 958 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 OAZ3Q9UMX2 235 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 FXYD1O00168 92 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PTGESO14684 152 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CAPN15O75808 1086 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SMPD1P17405 629 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 IMPDH1P20839 514 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ATP4BP51164 291 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CLCN5P51795 746 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 GALNT1Q10472 559 aaPredicted RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PMS2P3Q13401 168 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ACAP2Q15057 778 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SLC36A3Q495N2 470 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 RANBP10Q6VN20 620 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PATL1Q86TB9 770 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PIM3Q86V86 326 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SLC22A9Q8IVM8 553 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SMG8Q8ND04 991 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 TNIP2Q8NFZ5 429 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 DQX1Q8TE96 717 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 DNAJB3Q8WWF6 145 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SENP8Q96LD8 212 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 UBXN10Q96LJ8 280 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 KATNBL1Q9H079 304 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CXorf21Q9HAI6 301 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CMTM6Q9NX76 183 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 HACD3Q9P035 362 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ABCD2Q9UBJ2 740 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 AQP12BA6NM10 295 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 BOLA2-SMG1P6H3BVE0 249 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CXCL11O14625 94 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 GIPC1O14908 333 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 MATN3O15232 486 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 FASP25445 335 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SOX11P35716 441 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF135P52742 658 aaPredicted RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CDKN2DP55273 166 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ATP6V0D1P61421 351 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 GRB7Q14451 532 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 INPP5AQ14642 412 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 SNX17Q15036 470 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 GPR107Q5VW38 600 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF772Q68DY9 489 aaPredicted RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 KIAA0408Q6ZU52 694 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CCDC117Q8IWD4 279 aaPredicted RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 AQP12AQ8IXF9 295 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 ADAMTS16Q8TE57 1224 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 HIPK3Q9H422 1215 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 RPF2Q9H7B2 306 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 PTBP2Q9UKA9 531 aaKnown RBP10.94□□□□□ -0.66
SNIP1-204ENST00000638725 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 DNAJC15Q9Y5T4 150 aa10.94□□□□□ -0.66
SNIP1-204ENST00000638725 BRCA1P38398 1863 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 A0A1W2PPW3 197 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
SNIP1-204ENST00000638725 LRRC14BA6NHZ5 514 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 BBIP1A8MTZ0 92 aa10.93□□□□□ -0.66
SNIP1-204ENST00000638725 H3BMQ9 156 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms