RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CLK1P49759 484 aaKnown RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 SMAD3P84022 425 aaKnown RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 CYP4F8P98187 520 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 GNA12Q03113 381 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 IL10RBQ08334 325 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 TMC7Q7Z402 723 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 TREML1Q86YW5 311 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 HS6ST3Q8IZP7 471 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PPFIBP2Q8ND30 876 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 OVCA2Q8WZ82 227 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 BADQ92934 168 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 CCT7Q99832 543 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PCDHGB5Q9Y5G0 923 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 TGM5O43548 720 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 SMIM18P0DKX4 95 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 CNTFP26441 200 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 GRM2Q14416 872 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 ZNF235Q14590 738 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 C10orf62Q5T681 223 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 GRTP1Q5TC63 336 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 ZCCHC23Q6ZST2 131 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 KLHDC8BQ8IXV7 354 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 PPHLN1Q8NEY8 458 aaKnown RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 ARRDC2Q8TBH0 407 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 RBBP8Q99708 897 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 H3BNC9 293 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 CBX4O00257 560 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 FOXD2O60548 495 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 PRAMEF11O60813 436 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 CXCL14O95715 111 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 PIRTP0C851 137 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 HDCP19113 662 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 CRHR1P34998 444 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 SPRP35270 261 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 MAPKAPK2P49137 400 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 YBEYP58557 167 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 TBL3Q12788 808 aaKnown RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 N4BP2L1Q5TBK1 243 aaPredicted RBP11.56□□□□□ -0.56
CLN6-217ENST00000636964 CES4AQ5XG92 561 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 ISLR2Q6UXK2 745 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 C11orf74Q86VG3 221 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 TCEAL8Q8IYN2 117 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 FIBCD1Q8N539 461 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 STMN2Q93045 179 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 CENPKQ9BS16 269 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 IL23AQ9NPF7 189 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 SNX15Q9NRS6 342 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 SH3GLB1Q9Y371 365 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 TCAF1Q9Y4C2 921 aa11.56□□□□□ -0.56
CLN6-217ENST00000636964 LTBP2Q14767 1821 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 HOXD9P28356 352 aaPredicted RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 GABRR2P28476 465 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 MPP1Q00013 466 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CFAP157Q5JU67 520 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 RABGAP1LQ5R372 815 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ADGRF1Q5T601 910 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 FBXL19Q6PCT2 694 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ALYREFQ86V81 257 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PLD6Q8N2A8 252 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLN6-217ENST00000636964 MCUR1Q96AQ8 359 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SLC39A10Q9ULF5 831 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TMA7Q9Y2S6 64 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 KCTD3Q9Y597 815 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DOCK6Q96HP0 2047 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 MYLKQ15746 1914 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 AP3B1O00203 1094 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SGTAO43765 313 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 FGBP02675 491 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 F11P03951 625 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DLDP09622 509 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 ARNTP27540 789 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PGM1P36871 562 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 AVPR1AP37288 418 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CDH4P55283 916 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 IRF9Q00978 393 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DLG1Q12959 904 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ZNF177Q13360 481 aaPredicted RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 CHI3L2Q15782 390 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 STXBP5Q5T5C0 1151 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 LINGO4Q6UY18 593 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PLD4Q96BZ4 506 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TRMT2BQ96GJ1 504 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TTC1Q99614 292 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 IER2Q9BTL4 223 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TMEM120AQ9BXJ8 343 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms