RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PCDHAC1Q9H158 963 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 ARNT2Q9HBZ2 717 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 PCDHGB4Q9UN71 923 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 PCDHGB5Q9Y5G0 923 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 OR1I1O60431 355 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 IPO13O94829 963 aaKnown RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 FGFR3P22607 806 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 HOXD9P28356 352 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 PPARGP37231 505 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 RALGDSQ12967 914 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 GPR17Q13304 367 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 PFKFB4Q16877 469 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 SCIMPQ6UWF3 145 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 CYHR1Q6ZMK1 362 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 SDCCAG8Q86SQ7 713 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 FBXO22Q8NEZ5 403 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 SPPL2BQ8TCT7 592 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 PRICKLE1Q96MT3 831 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 SLC30A3Q99726 388 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 SLC24A3Q9HC58 644 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 TRPC7Q9HCX4 862 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 LOC285095A0A1B0GVY8 99 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 TCAF2A6NFQ2 919 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 AP3B1O00203 1094 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 CD3EAPO15446 510 aaKnown RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 APOA4P06727 396 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 MTTPP55157 894 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 KLC1Q07866 573 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 TRIP10Q15642 601 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 CAPRIN2Q6IMN6 1127 aaKnown RBP18.92■□□□□ 0.62
CLN5-216ENST00000636780 OR4K2Q8NGD2 314 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 LRCH3Q96II8 777 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 IL1RL2Q9HB29 575 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 ANGPTL2Q9UKU9 493 aa18.92■□□□□ 0.62
CLN5-216ENST00000636780 PATJQ8NI35 1801 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 DRGXA6NNA5 263 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 IQCF5A8MTL0 148 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 A8MX80 341 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 H3BNX3 289 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 INPPL1O15357 1258 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 COCHO43405 550 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 DNAJA2O60884 412 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 DNAJB2P25686 324 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 HADHAP40939 763 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 TEX26Q8N6G2 289 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 KYQ8NBH2 561 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 MDGA1Q8NFP4 955 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 UBXN10Q96LJ8 280 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 SLC22A12Q96S37 553 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 ECSITQ9BQ95 431 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 RTKNQ9BST9 563 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 VN1R3Q9BXE9 311 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 POLR1EQ9GZS1 481 aaKnown RBP18.91■□□□□ 0.62
CLN5-216ENST00000636780 PIDD1Q9HB75 910 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 THSD7BQ9C0I4 1608 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 F5H5T6 163 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 SYN3O14994 580 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 PRAMEF11O60813 436 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 PRAMEF12O95522 483 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 SELPP16109 830 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 LMNTD2Q8IXW0 634 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 RDH11Q8TC12 318 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 GDPD5Q8WTR4 605 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 PRKD2Q9BZL6 878 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 POLR3BQ9NW08 1133 aaPredicted RBP18.91■□□□□ 0.62
CLN5-216ENST00000636780 IL37Q9NZH6 218 aa18.91■□□□□ 0.62
CLN5-216ENST00000636780 ARHGEF37A1IGU5 675 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 ARVCFO00192 962 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 THRAP10827 490 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 MYL4P12829 197 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 SH3BP2P78314 561 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 PFKPQ01813 784 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 IL10RBQ08334 325 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 PLA2G4EQ3MJ16 856 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 AGAP9Q5VTM2 703 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 DHDDSQ86SQ9 333 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 FAM110BQ8TC76 370 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 GSTO2Q9H4Y5 243 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 WDR41Q9HAD4 459 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 ZBTB26Q9HCK0 441 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 TLR9Q9NR96 1032 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 ADA2Q9NZK5 511 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 SUFUQ9UMX1 484 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 BTRCQ9Y297 605 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 A0A087X1B8 175 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 RNASEH1O60930 286 aaKnown RBP18.9■□□□□ 0.62
CLN5-216ENST00000636780 GLP2RO95838 553 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 PMLP29590 882 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 PRKAA2P54646 552 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
CLN5-216ENST00000636780 GNA12Q03113 381 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 GRAMD1BQ3KR37 738 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 AGKQ53H12 422 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 TMCO4Q5TGY1 634 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 PAOXQ6QHF9 649 aa18.9■□□□□ 0.62
CLN5-216ENST00000636780 TTPALQ9BTX7 342 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms