RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 A0A1W2PP55 124 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 TSPAN11A1L157 253 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ANKRD66B4E2M5 251 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 FGF1P05230 155 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 TIMP2P16035 220 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 TPH1P17752 444 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 CCR3P51677 355 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ZBTB16Q05516 673 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 CNTN1Q12860 1018 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 CDH17Q12864 832 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 QPCTQ16769 361 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 UGP2Q16851 508 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ERN2Q76MJ5 926 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 NDUFAF2Q8N183 169 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 AADATQ8N5Z0 425 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 MCUQ8NE86 351 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 HCAR2Q8TDS4 363 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ZNF473Q8WTR7 871 aaKnown RBP14.51□□□□□ -0.09
LINC00339-208ENST00000634934 ART4Q93070 314 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 SMIM14Q96QK8 99 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 CCT8L2Q96SF2 557 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 NEUROG2Q9H2A3 272 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 FBXL12Q9NXK8 326 aa14.51□□□□□ -0.09
LINC00339-208ENST00000634934 UPK3BL1B0FP48 263 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 UPK3BL2E5RIL1 263 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 SMAPO00193 183 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 TP73O15350 636 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 AVILO75366 819 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 KIAA0754O94854 1291 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 APBB3O95704 486 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 ALPIP09923 528 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 PIRTP0C851 137 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 P2RY2P41231 377 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 GRIA4P48058 902 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 PXNP49023 591 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-208ENST00000634934 NEK3P51956 506 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 SEMG2Q02383 582 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 CAV1Q03135 178 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 PTPRRQ15256 657 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 DENND5AQ6IQ26 1287 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 LRRC8BQ6P9F7 803 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 ZNF534Q76KX8 674 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 CNPY4Q8N129 248 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 PRSS33Q8NF86 280 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 FBXO25Q8TCJ0 367 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 SERPINB12Q96P63 405 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 HDAC8Q9BY41 377 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 STMN4Q9H169 189 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-208ENST00000634934 CCDC134Q9H6E4 229 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 ACTR5Q9H9F9 607 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-208ENST00000634934 XAB2Q9HCS7 855 aaKnown RBP14.5□□□□□ -0.09
LINC00339-208ENST00000634934 CASS4Q9NQ75 786 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 CACNA1IQ9P0X4 2223 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 SERGEFQ9UGK8 458 aa14.5□□□□□ -0.09
LINC00339-208ENST00000634934 GMNCA6NCL1 334 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 A8MX80 341 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 ADRB3P13945 408 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 DRD3P35462 400 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 ABL2P42684 1182 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 CCDC15Q0P6D6 951 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 SFSWAPQ12872 951 aaKnown RBP14.49□□□□□ -0.09
LINC00339-208ENST00000634934 SLMAPQ14BN4 828 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 TNFAIP8L3Q5GJ75 292 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 DENND2CQ68D51 928 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 ERAP2Q6P179 960 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 TSSK4Q6SA08 328 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 ZDHHC24Q6UX98 284 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 USP45Q70EL2 814 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 FAM124AQ86V42 546 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 CAND1Q86VP6 1230 aaKnown RBP14.49□□□□□ -0.09
LINC00339-208ENST00000634934 MAML2Q8IZL2 1156 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-208ENST00000634934 BLOC1S5Q8TDH9 187 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 ARNT2Q9HBZ2 717 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 PCDH12Q9NPG4 1184 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 BFARQ9NZS9 450 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 SCML1Q9UN30 329 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 NCKAP1Q9Y2A7 1128 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 VPS13AQ96RL7 3174 aa14.49□□□□□ -0.09
LINC00339-208ENST00000634934 MUC6Q6W4X9 2439 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 A0A0J9YYE9 177 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 AP3B1O00203 1094 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 NEMP1O14524 444 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 TRBC1P01850 177 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 NFKBIAP25963 317 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 HNF1BP35680 557 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 ARL4CP56559 192 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 DHX9Q08211 1270 aaKnown RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 TCF15Q12870 199 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 POU6F1Q14863 301 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 CERCAMQ5T4B2 595 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 PIP5KL1Q5T9C9 394 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 KCTD16Q68DU8 428 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 C1orf210Q8IVY1 113 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 PDIK1LQ8N165 341 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms