RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RPS8P62241 208 aaKnown RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CTBP1Q13363 440 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 GRM4Q14833 912 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 WDR43Q15061 677 aaKnown RBP eCLIP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 ZRSR1Q15695 479 aaKnown RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 FIGNQ5HY92 759 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CATSPEREQ5SY80 951 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 RARS2Q5T160 578 aaKnown RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 ADGRF1Q5T601 910 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 DAB2IPQ5VWQ8 1189 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 RAET1GQ6H3X3 334 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 SULT1C3Q6IMI6 304 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 MAMDC4Q6UXC1 1216 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF852Q6ZMS4 543 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 Q6ZVU0 165 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 FJX1Q86VR8 437 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CAMK1DQ8IU85 385 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 RHPN2Q8IUC4 686 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 L3MBTL4Q8NA19 623 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 OR52J3Q8NH60 311 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF461Q8TAF7 563 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 EXOC6Q8TAG9 804 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 SH3RF2Q8TEC5 729 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 UBLCP1Q8WVY7 318 aaPredicted RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CKAP2Q8WWK9 683 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CPT1BQ92523 772 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CELF1Q92879 486 aaKnown RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 TRIB1Q96RU8 372 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 VCX2Q9H322 139 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 NTN4Q9HB63 628 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 MRM3Q9HC36 420 aaKnown RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 TUFT1Q9NNX1 390 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 IL37Q9NZH6 218 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 UXTQ9UBK9 157 aaPredicted RBP4.9□□□□□ -1.62
SDCBP-213ENST00000630925 PRSS50Q9UI38 385 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 MID2Q9UJV3 735 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 HCN2Q9UL51 889 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 CNTN6Q9UQ52 1028 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 PPIL1Q9Y3C6 166 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 PCDHA2Q9Y5H9 948 aa4.9□□□□□ -1.62
SDCBP-213ENST00000630925 PIK3C2BO00750 1634 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 A0A087WZY1 265 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 C2orf92A0A1B0GVN3 265 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 H0Y8X5 98 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 WRBO00258 174 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PLK4O00444 970 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CLIC2O15247 247 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PAPSS1O43252 624 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 HEXIM1O94992 359 aaKnown RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 OR6B1O95007 311 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CH25HO95992 272 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 GBAP04062 536 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 ZCCHC18P0CG32 403 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 AREGP15514 252 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CYP2B6P20813 491 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 MALP21145 153 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 ACP1P24666 158 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 KLRC1P26715 233 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CTNNB1P35222 781 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PPP1R2P41236 205 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SLC6A11P48066 632 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 LEPRP48357 1165 aaKnown RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 DGKEP52429 567 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 HK2P52789 917 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 MFAP4P55083 255 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 TIRAPP58753 221 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CDC42EP1Q00587 391 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PPARAQ07869 468 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 TARDBPQ13148 414 aaKnown RBP eCLIP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SNW1Q13573 536 aaKnown RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 STIM1Q13586 685 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 KRT24Q2M2I5 525 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF766Q5HY98 468 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 AFMIDQ63HM1 303 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 KIAA0930Q6ICG6 404 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 DGAT2L7PQ6IED9 249 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PPP1R2P3Q6NXS1 205 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CASC4Q6P4E1 433 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SARM1Q6SZW1 724 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 UNQ6494/PRO21346Q6UXR6 183 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CLEC17AQ6ZS10 378 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 USP37Q86T82 979 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 VPS36Q86VN1 386 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 KLHL7Q8IXQ5 586 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 TOP6BLQ8N6T0 577 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 TC2NQ8N9U0 490 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 POMGNT1Q8WZA1 660 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SLC9A6Q92581 669 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SPSB4Q96A44 273 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF707Q96C28 371 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 RASD2Q96D21 266 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 FBXL18Q96ME1 805 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 ALS2CR12Q96Q35 445 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 GAD1Q99259 594 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CYTH2Q99418 400 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 HAUS8Q9BT25 410 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 KLC2Q9H0B6 622 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms