RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 ABCC13Q9NSE7 274 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 TRIM3O75382 744 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 SP3Q02447 781 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 GRIK4Q16099 956 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 FAM153CQ494X1 144 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 BEND7Q8N7W2 519 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 PYDC1Q8WXC3 89 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 UROC1Q96N76 676 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 APBA2Q99767 749 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 DDX43Q9NXZ2 648 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 H0YJX3 145 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 MICAL2O94851 1124 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 STXBP1P61764 594 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 ORC1Q13415 861 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 CPTPQ5TA50 214 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 SPATA13Q96N96 652 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 RBM4BQ9BQ04 359 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 C3P01024 1663 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 BBIP1A8MTZ0 92 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 ASGR1P07306 291 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 CLIP3Q96DZ5 547 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 ABI3Q9P2A4 366 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 NAV1Q8NEY1 1877 aa13.22□□□□□ -0.29
SYNGAP1-208ENST00000629380 PRH1P02810 166 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 HMGCRP04035 888 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 TNFRSF8P28908 595 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SLC28A2O43868 658 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 GSTT2BP0CG30 244 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ASMTP46597 345 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ERVK-24P63145 666 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 TUBA4AP68366 448 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 CYP4F2P78329 520 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 BTG3Q14201 252 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 PTCHD4Q6ZW05 846 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 KLHL32Q96NJ5 620 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 MRIQ9BWK5 157 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 GULP1Q9UBP9 304 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 VTNP04004 478 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 S100A2P29034 98 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 C12orf4Q9NQ89 552 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 VAPBO95292 243 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 TAF5Q15542 800 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ERICH5Q6P6B1 374 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SGCDQ92629 289 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SPTLC1O15269 473 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SLC35G4P0C7Q5 338 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 LIPEQ05469 1076 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 CPNE2Q96FN4 548 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 HBS1LQ9Y450 684 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 SNAPC5O75971 98 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 PDPRQ8NCN5 879 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZNF398Q8TD17 642 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 FTHL17Q9BXU8 183 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 ATXN10Q9UBB4 475 aa13.21□□□□□ -0.29
SYNGAP1-208ENST00000629380 PROCP04070 461 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 SLC6A3Q01959 620 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 RANBP3LQ86VV4 465 aaPredicted RBP13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 FBXW8Q8N3Y1 598 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 ACTL7BQ9Y614 415 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 NFASCO94856 1347 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 RPTORQ8N122 1335 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 ARID1AO14497 2285 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 WNT10BO00744 389 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 CDH5P33151 784 aaPredicted RBP13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 CD86P42081 329 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 GCNT1Q02742 428 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 RNF31Q96EP0 1072 aa13.21□□□□□ -0.3
SYNGAP1-208ENST00000629380 OR7A10O76100 309 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 SAGP10523 405 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 STOMP27105 288 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms