RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 HECTD3Q5T447 861 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 TTI2Q6NXR4 508 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RPUSD3Q6P087 351 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 CDC73Q6P1J9 531 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 TMEM81Q6P7N7 255 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 KLHL35Q6PF15 583 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SLC39A5Q6ZMH5 540 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 FAM83HQ6ZRV2 1179 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 FAM43BQ6ZT52 329 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 KDELC2Q7Z4H8 507 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 BRSK2Q8IWQ3 736 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SCN4BQ8IWT1 228 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 ADGRF2Q8IZF7 708 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 KCTD6Q8NC69 237 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 ADPRHL1Q8NDY3 354 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RAB40AQ8WXH6 277 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 LRRC59Q96AG4 307 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 INTS12Q96CB8 462 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 PERPQ96FX8 193 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 P2RY11Q96G91 374 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PRR11Q96HE9 360 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 KLHL15Q96M94 604 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CMTM3Q96MX0 182 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 ZWILCHQ9H900 591 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CCDC177Q9NQR7 707 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 MRPL15Q9P015 296 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 PEMTQ9UBM1 199 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 MORF4L1Q9UBU8 362 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 UGGT1Q9NYU2 1555 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SPATA31A1Q5TZJ5 1347 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SHPRHQ149N8 1683 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 ZC3H13Q5T200 1668 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 CAMTA1Q9Y6Y1 1673 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SETD5Q9C0A6 1442 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 LRRC9Q6ZRR7 1453 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 FAM135AQ9P2D6 1515 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 FAM237BA0A1B0GVD1 139 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 BICDL2A1A5D9 508 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 TTC36A6NLP5 189 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 A8MV72 311 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 EIF3CLB5ME19 914 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 FYB1O15117 783 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 LDLRAD4O15165 306 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 BCAT2O15382 392 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 TBCAO75347 108 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 EIF2S1P05198 315 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 CHRM4P08173 479 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 HSP90AB1P08238 724 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 CDH2P19022 906 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 MCM3P25205 808 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GSTM2P28161 218 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 DUSP1P28562 367 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 AVPR2P30518 371 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 HOXA11P31270 313 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 UBA7P41226 1012 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GARSP41250 739 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 LMAN1P49257 510 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GAS1P54826 345 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GPC5P78333 572 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 IL13RA2Q14627 380 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 KPNB1Q14974 876 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 DPCR1Q3MIW9 517 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 ZNF667Q5HYK9 610 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 SARM1Q6SZW1 724 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 FAM47EQ6ZV65 393 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GALNTL5Q7Z4T8 443 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GALNT7Q86SF2 657 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 SNX32Q86XE0 403 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GALNT13Q8IUC8 556 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 CNPY4Q8N129 248 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GHDCQ8N2G8 530 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 TMEM199Q8N511 208 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 PLD5Q8N7P1 536 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 TMEM116Q8NCL8 245 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 SLC44A5Q8NCS7 719 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 CADM4Q8NFZ8 388 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 GABPB2Q8TAK5 448 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 ARHGEF2Q92974 986 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 FAM149B1Q96BN6 582 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 VMP1Q96GC9 406 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 ADPGKQ9BRR6 497 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 APOL6Q9BWW8 343 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 HDHD5Q9BXW7 423 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 SLC32A1Q9H598 525 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 RABEP2Q9H5N1 569 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 PDE7BQ9NP56 450 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 ABHD10Q9NUJ1 306 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 TAB2Q9NYJ8 693 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 CPSF2Q9P2I0 782 aaKnown RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 SLCO3A1Q9UIG8 710 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 CDH22Q9UJ99 828 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 SIRT4Q9Y6E7 314 aaPredicted RBP3.35□□□□□ -1.87
VPS8-228ENST00000628962 MSH6P52701 1360 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 PNPLA6Q8IY17 1366 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 NINLQ9Y2I6 1382 aa3.35□□□□□ -1.87
VPS8-228ENST00000628962 PRDM15P57071 1507 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 ATP7AQ04656 1500 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 AHDC1Q5TGY3 1603 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 KIDINS220Q9ULH0 1771 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 TRBV5-3A0A0A0MS03 114 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms