RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	FAAP100	Q0VG06	881 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	TOP3A	Q13472	1001 aa	Predicted RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	IRGC	Q6NXR0	463 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	BTBD10	Q9BSF8	475 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	NOX1	Q9Y5S8	564 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	ASTN2	O75129	1339 aa	Predicted RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	TRPM1	Q7Z4N2	1603 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	PGRMC2	O15173	223 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	OTC	P00480	354 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	ZNF730	Q6ZMV8	503 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CADM2	Q8N3J6	435 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	ZNF540	Q8NDQ6	660 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	LINGO1	Q96FE5	620 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672		A0A1W2PQ72	361 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	EIF4B	P23588	611 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	KYAT3	Q6YP21	454 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	KCTD8	Q6ZWB6	473 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	GALNT13	Q8IUC8	556 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	AP3S1	Q92572	193 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	COX4I2	Q96KJ9	171 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	FCRL4	Q96PJ5	515 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	IL12RB2	Q99665	862 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	KCNF1	Q9H3M0	494 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	DDX18	Q9NVP1	670 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	DEC1	Q9P2X7	70 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CLEC4A	Q9UMR7	237 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	SP2	Q02086	613 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	NPNT	Q6UXI9	565 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	FAM183BP	Q6ZVS7	135 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	APLF	Q8IW19	511 aa	Predicted RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	KIAA0319L	Q8IZA0	1049 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CFAP52	Q8N1V2	620 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	SMG7	Q92540	1137 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	VCPIP1	Q96JH7	1222 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	AIF1L	Q9BQI0	150 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CPS1	P31327	1500 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	RLN1	P04808	185 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CACNA2D1	P54289	1103 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	RNASE12	Q5GAN4	147 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	TAPBPL	Q9BX59	468 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	ST3GAL5	Q9UNP4	418 aa		13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	CLTC	Q00610	1675 aa	Known RBP	13.9	□□□□□ -0.18
NRXN1-222	ENST00000625672	RFXANK	O14593	260 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	RIPK2	O43353	540 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	OR7A10	O76100	309 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	FGB	P02675	491 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	MC4R	P32245	332 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	CTSO	P43234	321 aa	Predicted RBP	13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	SWI5	Q1ZZU3	235 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	PTCHD4	Q6ZW05	846 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	ADAMTS15	Q8TE58	950 aa		13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	ZFR	Q96KR1	1074 aa	Known RBP	13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	ACE2	Q9BYF1	805 aa	Predicted RBP	13.9	□□□□□ -0.19
NRXN1-222	ENST00000625672	FAM86C2P	A6NEL3	165 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GRIA3	P42263	894 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	DPYSL3	Q14195	570 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PIK3R6	Q5UE93	754 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	DCLRE1A	Q6PJP8	1040 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	UBE2R2	Q712K3	238 aa	Predicted RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	OTOP2	Q7RTS6	562 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GPR142	Q7Z601	462 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CDH7	Q9ULB5	785 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	LOC102724159	A0A0B4J2E5	919 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CCDC162P	A2VCL2	907 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	OR1D2	P34982	312 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GNAL	P38405	381 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CASR	P41180	1078 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PWP2	Q15269	919 aa	Known RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	ATP13A5	Q4VNC0	1218 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	RBFA	Q8N0V3	343 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CAPN6	Q9Y6Q1	641 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	HAT1	O14929	419 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	TLR5	O60602	858 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	EIF2S3	P41091	472 aa	Known RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	ZNF132	P52740	706 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	MC1R	Q01726	317 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PLGLB1	Q02325	96 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GFOD2	Q3B7J2	385 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GALNT18	Q6P9A2	607 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	SSR3	Q9UNL2	185 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	UBOX5	O94941	541 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	FAU	P35544	74 aa	Known RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	KCNJ5	P48544	419 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CLCN5	P51795	746 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	GRM3	Q14832	879 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	ADAMTSL2	Q86TH1	951 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PIH1D2	Q8WWB5	315 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	LRCH1	Q9Y2L9	728 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PAX3	P23760	479 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	MRPS22	P82650	360 aa	Known RBP	13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	CHST4	Q8NCG5	386 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	WDR60	Q8WVS4	1066 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	LRRC7	Q96NW7	1537 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	NFATC1	O95644	943 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	PROC	P04070	461 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	LINC00032	P0C843	101 aa		13.89	□□□□□ -0.19
NRXN1-222	ENST00000625672	INTS5	Q6P9B9	1019 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms