RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PIGZQ86VD9 579 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 TNS4Q8IZW8 715 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 OR52K1Q8NGK4 314 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 GOLGA2P5Q9HBQ8 144 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 SYTL2Q9HCH5 934 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 TCF7L2Q9NQB0 619 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 COPG2Q9UBF2 871 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 MAGED2Q9UNF1 606 aaPredicted RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 LOC100653049A0A140TA62 436 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 KRT34O76011 436 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PSMC3P17980 439 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 IDUAP35475 653 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 SCNN1AP37088 669 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ABCG1P45844 678 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 HAAOP46952 286 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 NDUFV1P49821 464 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ABCE1P61221 599 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 LAPTM5Q13571 262 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PEX6Q13608 980 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 AKAP14Q86UN6 197 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PLD6Q8N2A8 252 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 ACDQ96AP0 544 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 OSMRQ99650 979 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 EMILIN2Q9BXX0 1053 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 SNX15Q9NRS6 342 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PCNTO95613 3336 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 ERVH48-1M5A8F1 160 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 ZNF195O14628 629 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 ZMPSTE24O75844 475 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 POLBP06746 335 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 NELFEP18615 380 aaKnown RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 GP5P40197 560 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 GLUD2P49448 558 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 RABGGTBP53611 331 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 COPAP53621 1224 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 MLLT10P55197 1068 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 COPZ1P61923 177 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 RACK1P63244 317 aaKnown RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 POU6F2P78424 691 aaPredicted RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 SNTA1Q13424 505 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 SYPL2Q5VXT5 272 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 ALKAL1Q6UXT8 129 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 BCL7CQ8WUZ0 217 aaPredicted RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 CERS2Q96G23 380 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 NARFLQ9H6Q4 476 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 RMND5AQ9H871 391 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 CYP4F11Q9HBI6 524 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 AP3M1Q9Y2T2 418 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 SF3B1O75533 1304 aaKnown RBP eCLIP12.5□□□□□ -0.41
LITAF-221ENST00000622633 M0QYT0 321 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 PIRO00625 290 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 BEST1O76090 585 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 PRLP01236 227 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 PPIL2Q13356 520 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 NAB1Q13506 487 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 SNAP47Q5SQN1 464 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 PDPK2PQ6A1A2 396 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 METTL2BQ6P1Q9 378 aaKnown RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 PHTF2Q8N3S3 785 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 CATSPER1Q8NEC5 780 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 TTLQ8NG68 377 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 TTC9Q92623 222 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 AGAP2Q99490 1192 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 ATP13A2Q9NQ11 1180 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 OLAHQ9NV23 265 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 RCOR3Q9P2K3 495 aaPredicted RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
LITAF-221ENST00000622633 POMPQ9Y244 141 aa12.5□□□□□ -0.41
LITAF-221ENST00000622633 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 SNAP91O60641 907 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 CDH1P12830 882 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ZNF182P17025 639 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 HARS2P49590 506 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 HK2P52789 917 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ESRRGP62508 458 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 IFITM3Q01628 133 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 GRTP1Q5TC63 336 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms