RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CNTFP26441 200 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 POU1F1P28069 291 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 STX2P32856 288 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 PSMC2P35998 433 aaKnown RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 CDH15P55291 814 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 ECT2LQ008S8 904 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 NEDD9Q14511 834 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 RALBP1Q15311 655 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 STPG1Q5TH74 334 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 TDRPQ86YL5 185 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 SCCPDHQ8NBX0 429 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 TRIM63Q969Q1 353 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 FBXL8Q96CD0 374 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 ZBTB10Q96DT7 871 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 TMEM19Q96HH6 336 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 GLIS2Q9BZE0 524 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 KCNN2Q9H2S1 579 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 CNGB3Q9NQW8 809 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 BEX4Q9NWD9 120 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 TERF2IPQ9NYB0 399 aa4.39□□□□□ -1.71
BRCA1-229ENST00000621897 CNOT7Q9UIV1 285 aaKnown RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 ATXN2Q99700 1313 aaKnown RBP4.39□□□□□ -1.71
BRCA1-229ENST00000621897 RFPL2O75678 378 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 SP1P08047 785 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 MMP2P08253 660 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 G6PDP11413 515 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 SRCP12931 536 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 SHMT1P34896 483 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 FUT6P51993 359 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 EIF2S3LQ2VIR3 472 aaKnown RBP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 GSG1LQ6UXU4 331 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 LRRC8DQ7L1W4 858 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 CHERPQ8IWX8 916 aaKnown RBP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 AGBL3Q8NEM8 1001 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 ZNF570Q96NI8 536 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 CSTL1Q9H114 145 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 C17orf75Q9HAS0 396 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 MAGEE1Q9HCI5 957 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 MKKSQ9NPJ1 570 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 SLC25A10Q9UBX3 287 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 RCOR1Q9UKL0 485 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 ADAM18Q9Y3Q7 739 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 ZNF711Q9Y462 761 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 LSM4Q9Y4Z0 139 aaKnown RBP4.38□□□□□ -1.71
BRCA1-229ENST00000621897 STON1Q9Y6Q2 735 aa4.38□□□□□ -1.71
BRCA1-229ENST00000621897 A0A0U1RQG5 324 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 PRR23AA6NEV1 266 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 MT-CYBP00156 380 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 POLBP06746 335 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 CD58P19256 250 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 PTMSP20962 102 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 GGT5P36269 586 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 SLC20A2Q08357 652 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 C2orf68Q2NKX9 166 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 KRTAP27-1Q3LI81 207 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 TXNDC8Q6A555 127 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 LCTLQ6UWM7 567 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 FOXL2NBQ6ZUU3 175 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 SFR1Q86XK3 245 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 ANKRD18AQ8IVF6 992 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 ODF3L1Q8IXM7 274 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 MAB21L3Q8N8X9 362 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 C11orf65Q8NCR3 313 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 LNX1Q8TBB1 728 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 GCC1Q96CN9 775 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 MAELQ96JY0 434 aaKnown RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 UBXN10Q96LJ8 280 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 MPHOSPH8Q99549 860 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 KXD1Q9BQD3 176 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 TKTL2Q9H0I9 626 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 GGA3Q9NZ52 723 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 FAM96BQ9Y3D0 163 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 LAS1LQ9Y4W2 734 aaKnown RBP4.37□□□□□ -1.71
BRCA1-229ENST00000621897 CGNL1Q0VF96 1302 aa4.37□□□□□ -1.71
BRCA1-229ENST00000621897 GAGE10A6NGK3 116 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 SOCS5O75159 536 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 UFM1P61960 85 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 RELQ04864 619 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 TROAPQ12815 778 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 PPP2R5BQ15173 497 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 RNPS1Q15287 305 aaKnown RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 RBBP5Q15291 538 aaKnown RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 TCTN1Q2MV58 587 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 OTUD3Q5T2D3 398 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 CYP26C1Q6V0L0 522 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 CCNI2Q6ZMN8 369 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 DCUN1D3Q8IWE4 304 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 DSELQ8IZU8 1212 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 ZCCHC9Q8N567 271 aaKnown RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 ZBTB2Q8N680 514 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 LMNTD1Q8N9Z9 388 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms