RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 ADRA1DP25100 572 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 ETV4P43268 484 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 MAGEA12P43365 314 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 CSRP3P50461 194 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 PRKCQQ04759 706 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 DMTNQ08495 405 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZNF235Q14590 738 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 LRRC14Q15048 493 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 DCAF4L2Q8NA75 395 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 SH3RF2Q8TEC5 729 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 CDKL2Q92772 493 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 SPON2Q9BUD6 331 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZFP14Q9HCL3 533 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 KCNK9Q9NPC2 374 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 IL1RAPL1Q9NZN1 696 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 CLEC4EQ9ULY5 219 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 SH3BP1Q9Y3L3 701 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 MTF2Q9Y483 593 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 DMXL1Q9Y485 3027 aa12.49□□□□□ -0.41
TNFAIP3-211ENST00000621150 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 MROH6A6NGR9 719 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PEX14O75381 377 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PAPSS2O95340 614 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CD72P21854 359 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 DRD4P21917 467 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 GP5P40197 560 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CSKP41240 450 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 SCTRP47872 440 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 SERPINH1P50454 418 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PLK1P53350 603 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 BMPR2Q13873 1038 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 POU6F1Q14863 301 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZNF77Q15935 545 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 SIRPB2Q5JXA9 342 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 LGSNQ5TDP6 509 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 KIAA0930Q6ICG6 404 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 RGS9BPQ6ZS82 235 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ASCL5Q7RTU5 278 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CARNMT1Q8N4J0 409 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ANKRD42Q8N9B4 389 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 FIBINQ8TAL6 211 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 BCAS4Q8TDM0 211 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 SMARCD2Q92925 531 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 APOPT1Q96IL0 206 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CCT8L2Q96SF2 557 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CPNE1Q99829 537 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 LHX3Q9UBR4 397 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 VPS51Q9UID3 782 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZMYM5Q9UJ78 669 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 H0Y626 953 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CBX4O00257 560 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 TM9SF1O15321 606 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 TMCC1O94876 653 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ZWINTO95229 277 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PENKP01210 267 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PRLP01236 227 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ALDOAP04075 364 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CES1P23141 567 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PSMA3P25788 255 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 NUMBP49757 651 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ACVR1Q04771 509 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CDK18Q07002 472 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 ITKQ08881 620 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 NSUN2Q08J23 767 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 GRM2Q14416 872 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PCSK7Q16549 785 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CDHR3Q6ZTQ4 885 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 RASSF3Q86WH2 238 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 BBS5Q8N3I7 341 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 PPHLN1Q8NEY8 458 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 MGARPQ8TDB4 240 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 VOPP1Q96AW1 172 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 AGAP2Q99490 1192 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 KLF6Q99612 283 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 RBBP8Q99708 897 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 CINPQ9BW66 212 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 MUC3BQ9H195 1237 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 TRPV4Q9HBA0 871 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 HEBP1Q9NRV9 189 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
TNFAIP3-211ENST00000621150 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms