RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 OOSP2Q86WS3 158 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 FSTL5Q8N475 847 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 ACBD4Q8NC06 268 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 ACTL9Q8TC94 416 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 PLEKHO2Q8TD55 490 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 RFKQ969G6 155 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SETD4Q9NVD3 440 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SUV39H1O43463 412 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 IFNA17P01571 189 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 CYP11B1P15538 503 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SLC6A2P23975 617 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 POU6F1Q14863 301 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 KHDC1Q4VXA5 237 aaKnown RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 LINGO2Q7L985 606 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 UCMAQ8WVF2 138 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 SCUBE2Q9NQ36 999 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 HDAC3O15379 428 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 CYP3A5P20815 502 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 OXCT1P55809 520 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 OR52K1Q8NGK4 314 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 CENPNQ96H22 339 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 VNN2O95498 520 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 ADNP2Q6IQ32 1131 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 COMTD1Q86VU5 262 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 METTL25Q8N6Q8 603 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 DPF3Q92784 378 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 KCTD15Q96SI1 283 aaPredicted RBP15.06■□□□□ 0
COL5A1-208ENST00000618395 DPAGT1Q9H3H5 408 aa15.06■□□□□ 0
COL5A1-208ENST00000618395 MLYCDO95822 493 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 TUBG1P23258 451 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 CBR4Q8N4T8 237 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 COLGALT1Q8NBJ5 622 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 GFOD1Q9NXC2 390 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 PTBP2Q9UKA9 531 aaKnown RBP15.05■□□□□ 0
COL5A1-208ENST00000618395 MLH3Q9UHC1 1453 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 GRM4Q14833 912 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 TCEAL6Q6IPX3 200 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 DDX53Q86TM3 631 aaKnown RBP15.05■□□□□ 0
COL5A1-208ENST00000618395 RC3H2Q9HBD1 1191 aaKnown RBP15.05■□□□□ 0
COL5A1-208ENST00000618395 GABBR1Q9UBS5 961 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 U3KQV3 271 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 RGL2O15211 777 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 C6orf222P0C671 652 aaPredicted RBP15.05■□□□□ 0
COL5A1-208ENST00000618395 SLC3A1Q07837 685 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 MADCAM1Q13477 382 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 ANKRD23Q86SG2 305 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 JPH3Q8WXH2 748 aaPredicted RBP15.05■□□□□ 0
COL5A1-208ENST00000618395 SLC30A2Q9BRI3 323 aa15.05■□□□□ 0
COL5A1-208ENST00000618395 OR2B3O76000 313 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 RAB3BP20337 219 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 CYP2A7P20853 494 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 FAM171BQ6P995 826 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 SPOCD1Q6ZMY3 1216 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 SLFN11Q7Z7L1 901 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 NELL1Q92832 810 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 RAP2CQ9Y3L5 183 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 TNPO3Q9Y5L0 923 aaKnown RBP15.05■□□□□ -0
COL5A1-208ENST00000618395 PRR5-ARHGAP8B1AHC4 643 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 IFNGP01579 166 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 ARHGAP8P85298 464 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 GOLGA7BQ2TAP0 167 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 GPSM1Q86YR5 675 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 ZC3H7AQ8IWR0 971 aaKnown RBP15.05■□□□□ -0
COL5A1-208ENST00000618395 ENGASEQ8NFI3 743 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 B8ZZF3 427 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 OGNP20774 298 aaKnown RBP15.05■□□□□ -0
COL5A1-208ENST00000618395 LIPEQ05469 1076 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 BST1Q10588 318 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 METTL4Q8N3J2 472 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 CNPPD1Q9BV87 410 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 TUBB1Q9H4B7 451 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 ARL8BQ9NVJ2 186 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 ASTN2O75129 1339 aaPredicted RBP15.05■□□□□ -0
COL5A1-208ENST00000618395 MAP3K6O95382 1288 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 GPIP06744 558 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 RAB4AP20338 218 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 MSX2P35548 267 aaPredicted RBP15.05■□□□□ -0
COL5A1-208ENST00000618395 ANKDD1AQ495B1 522 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 SYT12Q8IV01 421 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 C15orf40Q8WUR7 153 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 FCRL4Q96PJ5 515 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 PHOX2BQ99453 314 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 TMEM246Q9BRR3 403 aa15.05■□□□□ -0
COL5A1-208ENST00000618395 LOC100509620A0A075B734 347 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 HTR3EA5X5Y0 456 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 USP17L5A8MUK1 530 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 DNAJA2O60884 412 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 ADGRE1Q14246 886 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 DOK7Q18PE1 504 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 ITPKCQ96DU7 683 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 NPAS2Q99743 824 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PCYOX1Q9UHG3 505 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TDP2O95551 362 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 CHMP24386 653 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PIK3CBP42338 1070 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 CDH13P55290 713 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PRMT2P55345 433 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 HYIQ5T013 277 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms