RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PPARGC1AQ9UBK2 798 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 TRIM43BA6NCK2 446 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 C2orf71A6NGG8 1288 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 HPCAL1P37235 193 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PREPP48147 710 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 C16orf62Q7Z3J2 963 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 VN1R5Q7Z5H4 357 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 TRIM43Q96BQ3 446 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 MRPL40Q9NQ50 206 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ADA2Q9NZK5 511 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 IFT80Q9P2H3 777 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ARHGAP28Q9P2N2 729 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PLIN4Q96Q06 1357 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 SIGLEC16A6NMB1 481 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 KRT16P08779 473 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 GALK1P51570 392 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 JAG1P78504 1218 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CYP4Z1Q86W10 505 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 FBXL6Q8N531 539 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 USH1CQ9Y6N9 552 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 PRKAR1AP10644 381 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 NUDT1P36639 197 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 RAB28P51157 221 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 XKR6Q5GH73 641 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 GPN2Q9H9Y4 310 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 R4GN57 208 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 PHF2O75151 1096 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 NT5EP21589 574 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TFF2Q03403 129 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 ZACNQ401N2 412 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 KLHL6Q8WZ60 621 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 RAB7BQ96AH8 199 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TUBGCP3Q96CW5 907 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 FAM86C1Q9NVL1 165 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 OR5K4A6NMS3 321 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 ACOT7O00154 380 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 GMFGO60234 142 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 C5AR1P21730 350 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 MAGEA11P43364 429 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 RPS7P62081 194 aaKnown RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 KCNK18Q7Z418 384 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 DLG3Q92796 817 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 PRICKLE1Q96MT3 831 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SPATA9Q9BWV2 254 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TTYH1Q9H313 450 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 A0A1W2PPC1 479 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 CHADO15335 359 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 BUD31P41223 144 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SNTA1Q13424 505 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 CST6Q15828 149 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 MROH9Q5TGP6 573 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TAC4Q86UU9 113 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TGM7Q96PF1 710 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 B3GNT5Q9BYG0 378 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SLC6A14Q9UN76 642 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 CASZ1Q86V15 1759 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 ERCC1P07992 297 aaPredicted RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SPATA31C1P0DKV0 1188 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 ETF1P62495 437 aaKnown RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 MRPS22P82650 360 aaKnown RBP10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 FAM162AQ96A26 154 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 CAAP1Q9H8G2 361 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 TLR6Q9Y2C9 796 aa10.94□□□□□ -0.66
POLR2A-209ENST00000617998 KCNE1P15382 129 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 CDC25BP30305 580 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 HTR7P34969 479 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 SERPINB8P50452 374 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 TOB1P50616 345 aaPredicted RBP10.93□□□□□ -0.66
POLR2A-209ENST00000617998 CAND1Q86VP6 1230 aaKnown RBP10.93□□□□□ -0.66
POLR2A-209ENST00000617998 HORMAD2Q8N7B1 307 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
POLR2A-209ENST00000617998 NMRAL1Q9HBL8 299 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 GOLGA8RI6L899 631 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 TRAFD1O14545 582 aaPredicted RBP10.93□□□□□ -0.66
POLR2A-209ENST00000617998 IFNA14P01570 189 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 NOS3P29474 1203 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 CYP4F2P78329 520 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 ARG2P78540 354 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 DSC1Q08554 894 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 SF3B4Q15427 424 aaKnown RBP eCLIP10.93□□□□□ -0.667e-7■■■■□ 25.2
POLR2A-209ENST00000617998 RTP2Q5QGT7 225 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 STXBP5Q5T5C0 1151 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 RBBP8Q99708 897 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 C9IYK1 514 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 H3BUI4 141 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 TSPAN6O43657 245 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 GSTM1P09488 218 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 GLRBP48167 497 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 BHLHB9Q6PI77 547 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 LCLAT1Q6UWP7 414 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 B4GALNT4Q76KP1 1039 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 RNF44Q7L0R7 432 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 PRUNE1Q86TP1 453 aa10.93□□□□□ -0.66
POLR2A-209ENST00000617998 FSTL5Q8N475 847 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms