RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NEFHP12036 1026 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 SRCP12931 536 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 LPOP22079 712 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 LIMK2P53671 638 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 CNGA3Q16281 694 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 EML3Q32P44 896 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 CARD16Q5EG05 197 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 MROH9Q5TGP6 573 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 ESRP1Q6NXG1 681 aaKnown RBP16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 CCDC91Q7Z6B0 441 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 LCA5Q86VQ0 697 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 C4orf33Q8N1A6 199 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 PJA1Q8NG27 643 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 SPOCK2Q92563 424 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TSPAN17Q96FV3 270 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TRIB3Q96RU7 358 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TREX1Q9NSU2 369 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 MKS1Q9NXB0 559 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 DCDC2Q9UHG0 476 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 MID2Q9UJV3 735 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 TLK1Q9UKI8 766 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 PCDHGC4Q9Y5F7 938 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 COL4A3Q01955 1670 aa16.84■□□□□ 0.29
TRAPPC3-210ENST00000617904 GOLGA8CPA6NN73 597 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 STX7O15400 261 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 GLRA3O75311 464 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 CYP17A1P05093 508 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 ITGA2BP08514 1039 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 PYGBP11216 843 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 TYK2P29597 1187 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 LSP1P33241 339 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 VIPR2P41587 438 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 NUMBP49757 651 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 KPNA2P52292 529 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC18A2Q05940 514 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 MYLK3Q32MK0 819 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 FUT11Q495W5 492 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 TAF1BQ53T94 588 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 AARS2Q5JTZ9 985 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 KIAA0907Q7Z7F0 614 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 GALNT7Q86SF2 657 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 MFSD6LQ8IWD5 586 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 CNTN4Q8IWV2 1026 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 KDM1BQ8NB78 822 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 ELSPBP1Q96BH3 223 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 SHDQ96IW2 340 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 LRIG1Q96JA1 1093 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 VPS39Q96JC1 886 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 PAIP2Q9BPZ3 127 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 KXD1Q9BQD3 176 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 CPEB1Q9BZB8 566 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 GPR63Q9BZJ6 419 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 CIPCQ9C0C6 399 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 EPN3Q9H201 632 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 RHOJQ9H4E5 214 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 PLAC1Q9HBJ0 212 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 MAGEE1Q9HCI5 957 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 SMYD2Q9NRG4 433 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 EVLQ9UI08 416 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 FBXO10Q9UK96 956 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 GRID1Q9ULK0 1009 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 ERVW-1Q9UQF0 538 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 PCDHB9Q9Y5E1 797 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 R4GN57 208 aa16.83■□□□□ 0.28
TRAPPC3-210ENST00000617904 VPS13AQ96RL7 3174 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 A0A1W2PPM1 405 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 TTC24A2A3L6 582 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 NRG2O14511 850 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 SIN3BO75182 1162 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 SPAG7O75391 227 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 PGLSO95336 258 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 CD160O95971 181 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 C1QAP02745 245 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 SP9P0CG40 484 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 PSMC3P17980 439 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 RGRP47804 291 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 CD151P48509 253 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 DLG2Q15700 870 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 INSCQ1MX18 579 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 SLC44A4Q53GD3 710 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 FASTKD1Q53R41 847 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 AFTPHQ6ULP2 937 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 USP45Q70EL2 814 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 NAT16Q8N8M0 369 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 MGARPQ8TDB4 240 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 LMLNQ96KR4 655 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 OSBPL1AQ9BXW6 950 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 NLE1Q9NVX2 485 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 FBXO5Q9UKT4 447 aa16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 INTS6Q9UL03 887 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-210ENST00000617904 PHTF1Q9UMS5 762 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms