RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GABPB2Q8TAK5 448 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 CASKIN2Q8WXE0 1202 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 N4BP2L2Q92802 583 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 GLMNQ92990 594 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 NTAN1Q96AB6 310 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SGF29Q96ES7 293 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TRIM11Q96F44 468 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 PPP1R16AQ96I34 528 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 FEM1CQ96JP0 617 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 TBCBQ99426 244 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 PSMB7Q99436 277 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 CCDC3Q9BQI4 270 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 BPIFA3Q9BQP9 254 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SIK2Q9H0K1 926 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 RABEP2Q9H5N1 569 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 GULP1Q9UBP9 304 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 ZNF212Q9UDV6 495 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 IL36AQ9UHA7 158 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 VPS51Q9UID3 782 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 ATXN7L1Q9ULK2 861 aaPredicted RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 SIK3Q9Y2K2 1263 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SNX10Q9Y5X0 201 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 CSNK1G3Q9Y6M4 447 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 NOTCH2Q04721 2471 aa8.65□□□□□ -1.02
GPC6-202ENST00000617456 SPTAN1Q13813 2472 aaKnown RBP8.65□□□□□ -1.02
GPC6-202ENST00000617456 UBR5O95071 2799 aaPredicted RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 ZSCAN5CA6NGD5 496 aaPredicted RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 IGLON5A6NGN9 336 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 C2CD4BA6NLJ0 364 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SIGLEC16A6NMB1 481 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 LGALS16A8MUM7 142 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FPGTO14772 594 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 PLD2O14939 933 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SPINT1O43278 529 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 AP1G1O43747 822 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 KDM1AO60341 852 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 GCATO75600 419 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 TCEA3O75764 348 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 ANXA6P08133 673 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 KRT3P12035 628 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 ADRB3P13945 408 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 HGFP14210 728 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 RHOQP17081 205 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 DESP17661 470 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SDC4P31431 198 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 GCKP35557 465 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 NSFP46459 744 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 NEK2P51955 445 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 PDX1P52945 283 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 PHEXP78562 749 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FMO1Q01740 532 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 CCDC122Q5T0U0 273 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 MANEALQ5VSG8 457 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 KIAA1161Q6NSJ0 714 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 C22orf39Q6P5X5 142 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 DPY19L3Q6ZPD9 716 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 B3GNT8Q7Z7M8 397 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 VASH2Q86V25 355 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FBXO39Q8N4B4 442 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 PCDH20Q8N6Y1 951 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 ASB12Q8WXK4 309 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 CPA5Q8WXQ8 436 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 RAB7BQ96AH8 199 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 ALS2CR12Q96Q35 445 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SPON2Q9BUD6 331 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FOXP3Q9BZS1 431 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 MAGEH1Q9H213 219 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 VPS16Q9H269 839 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 TSPY26PQ9H489 355 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 GPR27Q9NS67 375 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 STARD5Q9NSY2 213 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FANCLQ9NW38 375 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SIRPGQ9P1W8 387 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 SPASTQ9UBP0 616 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 OR12D3Q9UGF7 316 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 APOBEC3BQ9UH17 382 aaKnown RBP8.64□□□□□ -1.03
GPC6-202ENST00000617456 PADI4Q9UM07 663 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 TMED5Q9Y3A6 229 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FADS3Q9Y5Q0 445 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 FLNCQ14315 2725 aa8.64□□□□□ -1.03
GPC6-202ENST00000617456 A0A0D9SEW6 157 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 I6L893 689 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 EIF3FO00303 357 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 NEMP1O14524 444 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 TPP1O14773 563 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 SUV39H1O43463 412 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ZMPSTE24O75844 475 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 GFPT2O94808 682 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 CELA2BP08218 269 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 PNMA6AP0CW24 399 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 MYCLP1P12525 358 aaPredicted RBP8.63□□□□□ -1.03
GPC6-202ENST00000617456 FERP16591 822 aa8.63□□□□□ -1.03
GPC6-202ENST00000617456 ZFXP17010 805 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms