RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 SIRPGQ9P1W8 387 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ARL5AQ9Y689 179 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SLC1A2P43004 574 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 TBCCQ15814 346 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ZNF697Q5TEC3 545 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 PM20D1Q6GTS8 502 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MARVELD2Q8N4S9 558 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MAPK15Q8TD08 544 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SH3RF2Q8TEC5 729 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 BTBD9Q96Q07 612 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 OR52B2Q96RD2 323 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ABCG8Q9H221 673 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 COG4Q9H9E3 785 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 CERS4Q9HA82 394 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 FAM50BQ9Y247 325 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 STX16-NPEPL1H3BU86 382 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ENPP3O14638 875 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 KLF11O14901 512 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 NCAM2O15394 837 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 GPR39O43194 453 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 RAMP2O60895 175 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SCNN1AP37088 669 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 GRIA4P48058 902 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 IDH3AP50213 366 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MAPK10P53779 464 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 NEPROQ6NW34 567 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 FNDC8Q8TC99 324 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ACTRT2Q8TDY3 377 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SKA2Q8WVK7 121 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SERPINB11Q96P15 392 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 RBM38Q9H0Z9 239 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 INIPQ9NRY2 104 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 RSL24D1Q9UHA3 163 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 TRHDEQ9UKU6 1024 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 PCDHGC4Q9Y5F7 938 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 TMX2-CTNND1H3BSU7 103 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 COX4I1P13073 169 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 GJA1P17302 382 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 CDH2P19022 906 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 DSC3Q14574 896 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 OGFRL1Q5TC84 451 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 MBLAC2Q68D91 279 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 NCCRP1Q6ZVX7 275 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 COLGALT2Q8IYK4 626 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 FSTL5Q8N475 847 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 TDRD5Q8NAT2 981 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 DIS3LQ8TF46 1054 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 CMTM5Q96DZ9 223 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 APOL5Q9BWW9 433 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 UTP6Q9NYH9 597 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 FETUBQ9UGM5 382 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 PSMD13Q9UNM6 376 aa14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 AAR2Q9Y312 384 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-208ENST00000617339 ARVCFO00192 962 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 JUNP05412 331 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 XRCC1P18887 633 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ARSDP51689 593 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 CSE1LP55060 971 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ABCE1P61221 599 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ATP1A4Q13733 1029 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 IKBKEQ14164 716 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 FUT10Q6P4F1 479 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 MAVSQ7Z434 540 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 BHLHE22Q8NFJ8 381 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 TSPAN14Q8NG11 270 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 OR13C4Q8NGS5 318 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 PKP2Q99959 881 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 CASS4Q9NQ75 786 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 SELENONQ9NZV5 590 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ARHGAP26Q9UNA1 814 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ACOT9Q9Y305 439 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 CEPT1Q9Y6K0 416 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 MLNP12872 115 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 SYN1P17600 705 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 HOXC8P31273 242 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 LIMK2P53671 638 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 TWF1Q12792 350 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ARL13AQ5H913 290 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 ARCQ7LC44 396 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 PAWRQ96IZ0 340 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 NAT9Q9BTE0 207 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 PAIP1Q9H074 479 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 EPB41L1Q9H4G0 881 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 FBXO5Q9UKT4 447 aa14.52□□□□□ -0.09
SHROOM1-208ENST00000617339 TYW5A2RUC4 315 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 M0QZQ0 153 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TNFRSF10BO14763 440 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 MATN3O15232 486 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SERPINE1P05121 402 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 MBL2P11226 248 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 STMN1P16949 149 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 NR1H2P55055 460 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 XIAPP98170 497 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SULT2A1Q06520 285 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms