RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CAPRIN1Q14444 709 aaKnown RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC9B1Q4ZJI4 515 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLEC6AQ6EIG7 209 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 LINC01465Q8N7H1 131 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 C3orf58Q8NDZ4 430 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ABTB1Q969K4 478 aaPredicted RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 FCRL3Q96P31 734 aaPredicted RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 IL12RB2Q99665 862 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 C20orf27Q9GZN8 174 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 PIF1Q9H611 641 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 KCNK13Q9HB14 408 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 PLK2Q9NYY3 685 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 RGS17Q9UGC6 210 aaPredicted RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 GTF2IRD1Q9UHL9 959 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCDHGB4Q9UN71 923 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 TIMM22Q9Y584 194 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ICE1Q9Y2F5 2266 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 PHLPP1O60346 1717 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBBXA8MT70 800 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 HLA-DQB2P05538 268 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC35E2BP0CK96 405 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 MBL2P11226 248 aaPredicted RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 MCCD1P59942 119 aaPredicted RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 GNA12Q03113 381 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 TLDC1Q6P9B6 456 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANGPTL8Q6UXH0 198 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 MIER2Q8N344 545 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDKN2AIPNLQ96HQ2 116 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 RNF145Q96MT1 663 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 BTBD9Q96Q07 612 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 PPP1R10Q96QC0 940 aaKnown RBP5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ACOX2Q99424 681 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBED2Q9BTP6 218 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 RRAGCQ9HB90 399 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 SNX5Q9Y5X3 404 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 ITGB4P16144 1822 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 LAMA4Q16363 1823 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 STRCP1A6NGW2 1772 aa5.65□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ALDH1A2O94788 518 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 KRT6AP02538 564 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 KRT6BP04259 564 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ITGB6P18564 788 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 NELFEP18615 380 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 HDCP19113 662 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GRK4P32298 578 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCR10P46092 362 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 KRT6CP48668 564 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 HSPA14Q0VDF9 509 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CEACAM7Q14002 265 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 FUT11Q495W5 492 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM91A1Q658Y4 838 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 STEAP4Q687X5 459 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZYG11AQ6WRX3 759 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GK5Q6ZS86 529 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GLT6D1Q7Z4J2 308 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 LRRTM3Q86VH5 581 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR56A4Q8NGH8 313 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR10T2Q8NGX3 314 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR4L1Q8NH43 312 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACTRT2Q8TDY3 377 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DIS3LQ8TF46 1054 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CYGBQ8WWM9 190 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 TCF12Q99081 682 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 TMEM79Q9BSE2 394 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 C1orf21Q9H246 121 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ELOVL6Q9H5J4 265 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DDX18Q9NVP1 670 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 AGO1Q9UL18 857 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GNEQ9Y223 722 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ORC6Q9Y5N6 252 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 TBKBP1A7MCY6 615 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 A8MT66 165 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CD3EAPO15446 510 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CLDN11O75508 207 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CYBBP04839 570 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ABL2P42684 1182 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARHGDIAP52565 204 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 XIAPP98170 497 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ILF2Q12905 390 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 LCP2Q13094 533 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 TSNQ15631 228 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCNA10Q16322 511 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 MSANTD2Q6P1R3 559 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 UMODL1-AS1Q8N2C9 162 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DHRSXQ8N5I4 330 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GRIP2Q9C0E4 1043 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 PCDHAC1Q9H158 963 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADNPQ9H2P0 1102 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DNAJC28Q9NX36 388 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 BTRCQ9Y297 605 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCTD3Q9Y597 815 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 EVPLLA8MZ36 301 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 SNNO75324 88 aaPredicted RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ULK1O75385 1050 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 SNUPNO95149 360 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DLG1Q12959 904 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 BIRC2Q13490 618 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 DPYSQ14117 519 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 ALFQ53S48 1182 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms