RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SEMA4CQ9C0C4 833 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 RTN4Q9NQC3 1192 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 CNOT8Q9UFF9 292 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 SETXQ7Z333 2677 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 TENM4Q6N022 2769 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 TTC24A2A3L6 582 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 NOBOXO60393 691 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 FTLP02792 175 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 HGFP14210 728 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 UGT1A5P35504 534 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 TRIM23P36406 574 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 AP1S1P61966 158 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 TYRO3Q06418 890 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 SLC10A7Q0GE19 358 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 EIF3IQ13347 325 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 LBRQ14739 615 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 ZSCAN23Q3MJ62 389 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCDC183Q5T5S1 534 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 KIAA1614Q5VZ46 1190 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 OGFOD3Q6PK18 319 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 PSTKQ8IV42 348 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 Q8N9G6 341 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 PSKH2Q96QS6 385 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 STRADBQ9C0K7 418 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMEM168Q9H0V1 697 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 B4GALT6Q9UBX8 382 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 SEPT3Q9UH03 358 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 COL6A6A6NMZ7 2263 aa20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 ARHGEF17Q96PE2 2063 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMX2-CTNND1H3BSU7 103 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 HOXC4P09017 264 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 GZMAP12544 262 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 GLB1P16278 677 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 KELP23276 732 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 SLC5A2P31639 672 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCKBRP32239 447 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 HCAR3P49019 387 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 RENBPP51606 427 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 LY6DQ14210 128 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 ACOX1Q15067 660 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CERCAMQ5T4B2 595 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMCO4Q5TGY1 634 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCDC81Q6ZN84 652 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCNJLQ8IV13 435 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 FAM46DQ8NEK8 389 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCL4L1Q8NHW4 92 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 ZNF653Q96CK0 615 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMEM74Q96NL1 305 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 WDR26Q9H7D7 661 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 CYP4F12Q9HCS2 524 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 APPL1Q9UKG1 709 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 ATXN7L1Q9ULK2 861 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 PCDHGA7Q9Y5G6 932 aa20.83■□□□□ 0.93
TRAPPC3-208ENST00000616074 B4DGG1 531 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 DDX3XO00571 662 aaKnown RBP eCLIP20.82■□□□□ 0.922e-8■■■■■ 37.2
TRAPPC3-208ENST00000616074 TNFRSF10CO14798 259 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 ZNF135P52742 658 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 HLTFQ14527 1009 aaKnown RBP eCLIP20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 C14orf28Q4W4Y0 310 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 PNCKQ6P2M8 343 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 JAMLQ86YT9 394 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 LZTR1Q8N653 840 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 COQ10AQ96MF6 247 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 ZNF599Q96NL3 588 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 ZWILCHQ9H900 591 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 AIPL1Q9NZN9 384 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 MOSPD1Q9UJG1 213 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 PCDHGC4Q9Y5F7 938 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 SCINQ9Y6U3 715 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 RNF215Q9Y6U7 377 aa20.82■□□□□ 0.92
TRAPPC3-208ENST00000616074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 CAPN8A6NHC0 703 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 HTRA2O43464 458 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 PEX11BO96011 259 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 TCF4P15884 667 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 CR2P20023 1033 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 IL1R2P27930 398 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 PRKCIP41743 596 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 ZNF235Q14590 738 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 CNGA3Q16281 694 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 SMTNL2Q2TAL5 461 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 ANO6Q4KMQ2 910 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 SPECC1LQ69YQ0 1117 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 SPRED1Q7Z699 444 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 PGBD5Q8N414 524 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 SPOCK2Q92563 424 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 NUS1Q96E22 293 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 DPEP2Q9H4A9 486 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 ETNK2Q9NVF9 386 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 WDR70Q9NW82 654 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 LRIT1Q9P2V4 623 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 PISDQ9UG56 409 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 LOXL2Q9Y4K0 774 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 PIEZO2Q9H5I5 2752 aa20.81■□□□□ 0.92
TRAPPC3-208ENST00000616074 ASH1LQ9NR48 2969 aaKnown RBP20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 PRSS38A1L453 326 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 GOLGA6L22H0YM25 854 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms