RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PCDHB1Q9Y5F3 818 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 STARP49675 285 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 GCNT7Q6ZNI0 430 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 ZC3H7AQ8IWR0 971 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 OR4L1Q8NH43 312 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 FNDC11Q9BVV2 318 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 TSPAN9O75954 239 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 TCF4P15884 667 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 GPR1P46091 355 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CCR4P51679 360 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 HSPA14Q0VDF9 509 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CWF19L1Q69YN2 538 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 ARHGAP36Q6ZRI8 547 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SEMA3CQ99985 751 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 LYVE1Q9Y5Y7 322 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 NR2F6P10588 404 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CTSEP14091 401 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 ACTR3P61158 418 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SULT2A1Q06520 285 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 PDPRQ8NCN5 879 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 RHOBTB2Q9BYZ6 727 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 RMI1Q9H9A7 625 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 IFNGP01579 166 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CRHR1P34998 444 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CRYBB1P53674 252 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 DUSP16Q9BY84 665 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 PHF11Q9UIL8 331 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SUV39H1O43463 412 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC22A3O75751 556 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 LRIG2O94898 1065 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 LDOC1O95751 146 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 HLA-DQA2P01906 255 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 PRDX6P30041 224 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SCNN1GP51170 649 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 XKR6Q5GH73 641 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 INPP4AQ96PE3 977 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 XPR1Q9UBH6 696 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SAMHD1Q9Y3Z3 626 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SHOX2O60902 331 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 BPGMP07738 259 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 UGT1A5P35504 534 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 ADCYAP1R1P41586 468 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 INTS6LQ5JSJ4 861 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 APTXQ7Z2E3 356 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 COX4I2Q96KJ9 171 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 OMDQ99983 421 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 SENP6Q9GZR1 1112 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 ASAH2Q9NR71 780 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 DNAJC28Q9NX36 388 aa17.45■□□□□ 0.38
HMGXB3-206ENST00000613459 EPORP19235 508 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CNTN2Q02246 1040 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CCDC36Q8IYA8 594 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 SSU72Q9NP77 194 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 TMEM138Q9NPI0 162 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 GMEB1Q9Y692 573 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 SPATA31C2B4DYI2 1134 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 ENPEPQ07075 957 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 NOMO2Q5JPE7 1267 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 PSMD13Q9UNM6 376 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 VWA7Q9Y334 891 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 BCL9O00512 1426 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 PXDNQ92626 1479 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 MEIS2O14770 477 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CCNYL3P0C7X3 344 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 S100GP29377 79 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CAPSQ13938 189 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 GPAT3Q53EU6 434 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 METTL21CQ5VZV1 264 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 ISLR2Q6UXK2 745 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 RASAL3Q86YV0 1011 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 DNAJB14Q8TBM8 379 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 RERGQ96A58 199 aaPredicted RBP17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 RCN3Q96D15 328 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 TDRD1Q9BXT4 1180 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 STOML2Q9UJZ1 356 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 RAB26Q9ULW5 256 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 PSMD11O00231 422 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 RFXANKO14593 260 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 CASP5P51878 434 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 AP5B1Q2VPB7 878 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 PANX1Q96RD7 426 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 DKK3Q9UBP4 350 aa17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 AGO1Q9UL18 857 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 R3HDM2Q9Y2K5 976 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-206ENST00000613459 TCRBV9S1A1TA0A576 114 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 PLK4O00444 970 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SPIBQ01892 262 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 RHAGQ02094 409 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 AADACL2Q6P093 401 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms