RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HSFX1Q9UBD0 423 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 DOCK3Q8IZD9 2030 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 E9PAM4 449 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 OXTRP30559 389 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 EFEMP1Q12805 493 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PSMD5Q16401 504 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 TICAM1Q8IUC6 712 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 AHI1Q8N157 1196 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 DLG3Q92796 817 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 C19orf60Q96EN9 201 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 RTP3Q9BQQ7 232 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 SP110Q9HB58 689 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PTTG2Q9NZH5 202 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 MYADML2A6NDP7 307 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 M0QZ92 97 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 ANGPT2O15123 496 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 HGFP14210 728 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 CDH2P19022 906 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 CCNCP24863 283 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PCSK1P29120 753 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 GRK4P32298 578 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 HADHAP40939 763 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 SERPINH1P50454 418 aaKnown RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 NR1H2P55055 460 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 ZIK1Q3SY52 487 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PM20D1Q6GTS8 502 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 EGFL6Q8IUX8 553 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 FUNDC1Q8IVP5 155 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 SHCBP1Q8NEM2 672 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 FBXL20Q96IG2 436 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 TMEM74Q96NL1 305 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 AGO3Q9H9G7 860 aaKnown RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 ENTPD7Q9NQZ7 604 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 IRAK2O43187 625 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 TFPTP0C1Z6 253 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 CDK4P11802 303 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PCNAP12004 261 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 CRYBB1P53674 252 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PRKAA2P54646 552 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 POU4F1Q01851 419 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PTPRRQ15256 657 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 GNASQ5JWF2 1037 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 TTC33Q6PID6 262 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 POTEHQ6S545 545 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 RANBP10Q6VN20 620 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 AGMOQ6ZNB7 445 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 ACOX2Q99424 681 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 AP5M1Q9H0R1 490 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PRG3Q9Y2Y8 225 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 HS3ST4Q9Y661 456 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 STRNO43815 780 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 HCAR3P49019 387 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PRKCQQ04759 706 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PPP1R8Q12972 351 aaKnown RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 SQLEQ14534 574 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 MARC1Q5VT66 337 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 OVOS1Q6IE37 1185 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 CYHR1Q6ZMK1 362 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 CFAP52Q8N1V2 620 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 PBXIP1Q96AQ6 731 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 ZFRQ96KR1 1074 aaKnown RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 SLAMF8Q9P0V8 285 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 FAF1Q9UNN5 650 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 DMTF1Q9Y222 760 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 MYRFQ9Y2G1 1151 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-207ENST00000612273 DNAJC15Q9Y5T4 150 aa14.08□□□□□ -0.16
COL6A1-207ENST00000612273 ANKRD33BA6NCL7 494 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 SUPT3HB4E1H0 165 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 NME4O00746 187 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 ENPP3O14638 875 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CAPN3P20807 821 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CD52P31358 61 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 C6orf10Q5SRN2 563 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 SPATA2LQ8IUW3 424 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 PELI3Q8N2H9 469 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 EFHD1Q9BUP0 239 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 SLC25A23Q9BV35 468 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 GSTO2Q9H4Y5 243 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CATSPERBQ9H7T0 1116 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 OSER1Q9NX31 292 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CDH9Q9ULB4 789 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 MBLAC1A4D2B0 266 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 NPHS1O60500 1241 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 TMCC1O94876 653 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 PRDX3P30048 256 aaKnown RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CYP51A1Q16850 503 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 RAP1GAP2Q684P5 730 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 ISCA2Q86U28 154 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 LCA5Q86VQ0 697 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms