RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MAGEH1Q9H213 219 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 DNMT3LQ9UJW3 386 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PRMT5O14744 637 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 NPHS1O60500 1241 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 EOMESO95936 686 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 VCLP18206 1134 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 XRCC1P18887 633 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 ABL2P42684 1182 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PLIN5Q00G26 463 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 RALGDSQ12967 914 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 GPR17Q13304 367 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 GALNT3Q14435 633 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 LPIN1Q14693 890 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ACAP2Q15057 778 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PDK3Q15120 406 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CTC1Q2NKJ3 1217 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SGO1Q5FBB7 561 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 FAM156AQ8NDB6 213 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TRIB2Q92519 343 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TMEM209Q96SK2 561 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TM6SF2Q9BZW4 377 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ACTR8Q9H981 624 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 EMCNQ9ULC0 261 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SLC8A2Q9UPR5 921 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TLR6Q9Y2C9 796 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PCDHGC4Q9Y5F7 938 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SMIM31A0A1B0GVY4 71 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZBBXA8MT70 800 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SLC22A2O15244 555 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 RPP40O75818 363 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 CCR10P46092 362 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 MTTPP55157 894 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 LIN52Q52LA3 116 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ALFQ53S48 1182 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 C14orf80Q86SX3 495 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZNF280BQ86YH2 543 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 MAPK15Q8TD08 544 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 BTBD9Q96Q07 612 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CCDC106Q9BWC9 280 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 C20orf27Q9GZN8 174 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 KCTD3Q9Y597 815 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 COL4A5P29400 1685 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 OR51F1A6NGY5 319 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 J3KR12 359 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 INPP4BO15327 924 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZBTB14O43829 449 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TNFAIP8O95379 198 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZNF23P17027 643 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 FASP25445 335 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SLC26A3P40879 764 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 GRIA3P42263 894 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TTPAP49638 278 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 RPS24P62847 133 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 IL1RL1Q01638 556 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CYP51A1Q16850 503 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TTC33Q6PID6 262 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 AFTPHQ6ULP2 937 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 FNDC5Q8NAU1 212 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 RMND5BQ96G75 393 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 FEM1CQ96JP0 617 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PANX3Q96QZ0 392 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SCUBE2Q9NQ36 999 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TMLHEQ9NVH6 421 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SH3BP1Q9Y3L3 701 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 MYADML2A6NDP7 307 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZNF197O14709 1029 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ADCY6O43306 1168 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SH3BP5O60239 455 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PQBP1O60828 265 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 HAPLN1P10915 354 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 ADRM1Q16186 407 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TMEM259Q4ZIN3 620 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 PPM1LQ5SGD2 360 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CLEC6AQ6EIG7 209 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 FUT10Q6P4F1 479 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 DEFB128Q7Z7B8 93 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 DENND1CQ8IV53 801 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 BRSK1Q8TDC3 778 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ZBED2Q9BTP6 218 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SEMA6AQ9H2E6 1030 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 MFSD1Q9H3U5 465 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 GPBP1L1Q9HC44 474 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 CSNK1G1Q9HCP0 422 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TNPO3Q9Y5L0 923 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 KIAA0100Q14667 2235 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 CNTRLQ7Z7A1 2325 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 EPOP01588 193 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 COL6A1P12109 1028 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 OGNP20774 298 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 CHN2P52757 468 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ARHGEF7Q14155 803 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 HERC3Q15034 1050 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ARMC12Q5T9G4 340 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 C17orf99Q6UX52 265 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SH2D5Q6ZV89 423 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms