RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PNPLA4P41247 253 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 YAP1P46937 504 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TNK2Q07912 1038 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 RAB39AQ14964 217 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 PCSK7Q16549 785 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TMEM207Q6UWW9 146 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 BHLHA9Q7RTU4 235 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 ARHGAP12Q8IWW6 846 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TNIP2Q8NFZ5 429 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADAMTS16Q8TE57 1224 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TMEM40Q8WWA1 233 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 EXT2Q93063 718 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 FCRL5Q96RD9 977 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC38A7Q9NVC3 462 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TBCCD1Q9NVR7 557 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 CMTM6Q9NX76 183 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 CDH7Q9ULB5 785 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TIMM13Q9Y5L4 95 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 TRIM64A6NGJ6 449 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCL22O00626 93 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 EI24O14681 340 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 HLA-DQB2P05538 268 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MTHFD1P11586 935 aaKnown RBP15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CXCR3P49682 368 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MAPK10P53779 464 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 STX1BP61266 288 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 UGT3A2Q3SY77 523 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 TAC4Q86UU9 113 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PIM3Q86V86 326 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ATPAF2Q8N5M1 289 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ROPN1LQ96C74 230 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 FSD1LQ9BXM9 530 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 POLR1BQ9H9Y6 1135 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 NDFIP2Q9NV92 336 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 NEU3Q9UQ49 428 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 SH3GLB1Q9Y371 365 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 FNDC1Q4ZHG4 1894 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MYBPHLA2RUH7 354 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 LRRC14BA6NHZ5 514 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ACOX3O15254 700 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PSMD3O43242 534 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ANXA9O76027 345 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MT-ND1P03886 318 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ACADVLP49748 655 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCT8P50990 548 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCR3P51677 355 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 APLP1P51693 650 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CBX3Q13185 183 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 GRB7Q14451 532 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ATP6AP1Q15904 470 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 GPR158Q5T848 1215 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 IRAK1BP1Q5VVH5 260 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PM20D1Q6GTS8 502 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 KIAA0930Q6ICG6 404 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADGRG5Q8IZF4 528 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PACRGLQ8N7B6 248 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PCYOX1LQ8NBM8 494 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 TBC1D15Q8TC07 691 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 RNF34Q969K3 372 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZUFSPQ96AP4 578 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCDC126Q96EE4 140 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PGAP3Q96FM1 320 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MRGPRX2Q96LB1 330 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 MRGBPQ9NV56 204 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ABCD2Q9UBJ2 740 aa15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 PTBP2Q9UKA9 531 aaKnown RBP15.16■□□□□ 0.02
PCDHGB1-202ENST00000611598 ASB14A6NK59 587 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNF701M0R085 212 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 FASP25445 335 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 CDKN2DP55273 166 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 FOXA1P55317 472 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 ATP6V0D1P61421 351 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 SH3BP2P78314 561 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNF678Q5SXM1 525 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 TOP6BLQ8N6T0 577 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 HDAC10Q969S8 669 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 UBXN10Q96LJ8 280 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 DNAJC15Q9Y5T4 150 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 PDCD11Q14690 1871 aaKnown RBP15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 ARPC2O15144 300 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 CLOCKO15516 846 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 MAFKO60675 156 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 PAMP19021 973 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 IMPDH1P20839 514 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 PSMA4P25789 261 aaKnown RBP15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 MAGEA10P43363 369 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 BNIP3Q12983 259 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 NEDD8Q15843 81 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 UNC50Q53HI1 259 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 HECTD2Q5U5R9 776 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 MOB2Q70IA6 237 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC16A10Q8TF71 515 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 TANKQ92844 425 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZFP42Q96MM3 310 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 TMEM165Q9HC07 324 aa15.15■□□□□ 0.02
PCDHGB1-202ENST00000611598 CNGB3Q9NQW8 809 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms