RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MAPK15Q8TD08 544 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 ACTRT1Q8TDG2 376 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 FGF11Q92914 225 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 ZNF641Q96N77 438 aaPredicted RBP21.9■■□□□ 1.1
CBWD3-207ENST00000611426 DEPDC7Q96QD5 511 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 PEBP4Q96S96 227 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 SNRNP25Q9BV90 132 aaKnown RBP21.9■■□□□ 1.1
CBWD3-207ENST00000611426 SLC13A1Q9BZW2 595 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 TCEAL2Q9H3H9 227 aaPredicted RBP21.9■■□□□ 1.1
CBWD3-207ENST00000611426 PCDHB1Q9Y5F3 818 aa21.9■■□□□ 1.1
CBWD3-207ENST00000611426 CCDC66A2RUB6 948 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 CPED1A4D0V7 1026 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 TPP1O14773 563 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 ZNF185O15231 689 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PRPSAP2O60256 369 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 CTNNA1P35221 906 aaKnown RBP21.89■■□□□ 1.1
CBWD3-207ENST00000611426 ACTN2P35609 894 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 C1orf61Q13536 156 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 COL9A2Q14055 689 aaPredicted RBP21.89■■□□□ 1.1
CBWD3-207ENST00000611426 MESDQ14696 234 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 LRRC14Q15048 493 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PRRT3Q5FWE3 981 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PPP6R3Q5H9R7 873 aaPredicted RBP21.89■■□□□ 1.1
CBWD3-207ENST00000611426 FAXCQ5TGI0 409 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 ERAP2Q6P179 960 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 RFX8Q6ZV50 586 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PHACTR4Q8IZ21 702 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 CRELD1Q96HD1 420 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 KCTD15Q96SI1 283 aaPredicted RBP21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PCDH12Q9NPG4 1184 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 IP6K2Q9UHH9 426 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 PACSIN2Q9UNF0 486 aaPredicted RBP21.89■■□□□ 1.1
CBWD3-207ENST00000611426 COQ6Q9Y2Z9 468 aa21.89■■□□□ 1.1
CBWD3-207ENST00000611426 TSPAN11A1L157 253 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 GCATO75600 419 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 ERCC2P18074 760 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 ITPKBP27987 946 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 MIPP30301 263 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 PEX5P50542 639 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 IRF4Q15306 451 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 SOWAHCQ53LP3 525 aaPredicted RBP21.88■■□□□ 1.09
CBWD3-207ENST00000611426 BRAT1Q6PJG6 821 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 MACC1Q6ZN28 852 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 EFL1Q7Z2Z2 1120 aaKnown RBP21.88■■□□□ 1.09
CBWD3-207ENST00000611426 SRLQ86TD4 932 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 CAMK1DQ8IU85 385 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 UBL4BQ8N7F7 174 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 GLMNQ92990 594 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 TUBGCP5Q96RT8 1024 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 TRIM7Q9C029 511 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 PNMA8BQ9ULN7 279 aaPredicted RBP21.88■■□□□ 1.09
CBWD3-207ENST00000611426 PCDHA3Q9Y5H8 950 aa21.88■■□□□ 1.09
CBWD3-207ENST00000611426 DFFAO00273 331 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 CSO75390 466 aaKnown RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 PAFAH1B1P43034 410 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 PPARDQ03181 441 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 NR0B2Q15466 257 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 GUSBP11Q6P575 273 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 PSTKQ8IV42 348 aaKnown RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 TSEN2Q8NCE0 465 aaKnown RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 SNIP1Q8TAD8 396 aaKnown RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 UBXN4Q92575 508 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 TBATAQ96M53 351 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 ATP13A3Q9H7F0 1226 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 SP110Q9HB58 689 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 ASXL3Q9C0F0 2248 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 EME2A4GXA9 379 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 TMEM110-MUSTN1A8MSY1 372 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 LZTS3O60299 673 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 USP12O75317 370 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 ANXA6P08133 673 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 C6P13671 934 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 SERPINA4P29622 427 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 CXCR5P32302 372 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 RGRP47804 291 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 CSNK1DP48730 415 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 RPIAP49247 311 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 LIG3P49916 1009 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 PIGHQ14442 188 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 WSCD2Q2TBF2 565 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 TBC1D25Q3MII6 688 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 AFMIDQ63HM1 303 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 ARHGAP12Q8IWW6 846 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 PAF1Q8N7H5 531 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 ALG3Q92685 438 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 LRRC61Q9BV99 259 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 CINPQ9BW66 212 aaPredicted RBP21.87■■□□□ 1.09
CBWD3-207ENST00000611426 BOCQ9BWV1 1114 aa21.87■■□□□ 1.09
CBWD3-207ENST00000611426 LRRK1Q38SD2 2015 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 LMO7DNF2Z398 122 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 YY2O15391 372 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 SPOPO43791 374 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 PRKCGP05129 697 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 MPOP05164 745 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 TSHRP16473 764 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 TGM2P21980 687 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 HTR1BP28222 390 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 HCAR3P49019 387 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 BLKP51451 505 aa21.86■■□□□ 1.09
CBWD3-207ENST00000611426 ZNF135P52742 658 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms