RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 JUNP05412 331 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 URODP06132 367 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PMLP29590 882 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SERPINB5P36952 375 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 DNAJB13P59910 316 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PFKPQ01813 784 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 KLF10Q13118 480 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SEMA3AQ14563 771 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CCDC6Q16204 474 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 C6orf163Q5TEZ5 329 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 NXNQ6DKJ4 435 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 TMEM207Q6UWW9 146 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 GLT6D1Q7Z4J2 308 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SH3RF2Q8TEC5 729 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 FAM136AQ96C01 138 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 VWCEQ96DN2 955 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 ALG9Q9H6U8 611 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 GTSE1Q9NYZ3 720 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SLC7A8Q9UHI5 535 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CDYLQ9Y232 598 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 H0Y626 953 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PSMG1O95456 288 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PDHA1P08559 390 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PRSS56P0CW18 603 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 COX4I1P13073 169 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CR2P20023 1033 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 ERFP50548 548 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 DEFB103AP81534 67 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 NAA25Q14CX7 972 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CYTH1Q15438 398 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 RALGPS1Q5JS13 557 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 ZNF549Q6P9A3 640 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 FRMD7Q6ZUT3 714 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 RPS27LQ71UM5 84 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 SDCCAG8Q86SQ7 713 aaPredicted RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CCDC126Q96EE4 140 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SLC22A12Q96S37 553 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
NEK3-205ENST00000610828 TBX21Q9UL17 535 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 SSX2IPQ9Y2D8 614 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 FIS1Q9Y3D6 152 aa13.65□□□□□ -0.22
NEK3-205ENST00000610828 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 SNAP91O60641 907 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 CUL3Q13618 768 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 RIPOR1Q6ZS17 1223 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 NET1Q7Z628 596 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 KDM1BQ8NB78 822 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 OR4K2Q8NGD2 314 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 GPR150Q8NGU9 434 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 DTX3LQ8TDB6 740 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 CNDP1Q96KN2 507 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 LENG8Q96PV6 779 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 ANAPC1Q9H1A4 1944 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 A0A088AWK7 358 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 UBA6A0AVT1 1052 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 TBL1XO60907 577 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 PRLP01236 227 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 FDXRP22570 491 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 PPP3CCP48454 512 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 CCNG1P51959 295 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 STC1P52823 247 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 EPHB3P54753 998 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 ARF5P84085 180 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 RAB33AQ14088 237 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 TRMT5Q32P41 509 aaKnown RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 RYBPQ8N488 228 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 BHMTQ93088 406 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 ZNF689Q96CS4 500 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 HERC2P3Q9BVR0 1158 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 NLE1Q9NVX2 485 aaPredicted RBP13.64□□□□□ -0.23
NEK3-205ENST00000610828 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 RIMKLBQ9ULI2 386 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
NEK3-205ENST00000610828 TMCC1O94876 653 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 WISP3O95389 354 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms