RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 AGAP9Q5VTM2 703 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 ERO1BQ86YB8 467 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 C19orf60Q96EN9 201 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 SLC2A13Q96QE2 648 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 SLC2A11Q9BYW1 496 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 PNPLA3Q9NST1 481 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 GTF2IRD1Q9UHL9 959 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 DHRS12A0PJE2 317 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 B3GAT3O94766 335 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 MYL3P08590 195 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 HGFP14210 728 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 CAPN3P20807 821 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 SCNN1GP51170 649 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 PIGFQ07326 219 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 ISOC1Q96CN7 298 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 AAR2Q9Y312 384 aaKnown RBP20.46■□□□□ 0.87
SSBP3-216ENST00000610401 GOLGA8CPA6NN73 597 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 CLOCKO15516 846 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 PMS2P3Q13401 168 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 CARM1Q86X55 608 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 SGCDQ92629 289 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 PTERQ96BW5 349 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 TBATAQ96M53 351 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 ACOX2Q99424 681 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 ACTL7AQ9Y615 435 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 LTA4HP09960 611 aaKnown RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SLC7A1P30825 629 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SEMA3BQ13214 749 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SQLEQ14534 574 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 TECRLQ5HYJ1 363 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SAMD4BQ5PRF9 694 aaKnown RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 TMEM214Q6NUQ4 689 aaKnown RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 ALKAL1Q6UXT8 129 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 CYHR1Q6ZMK1 362 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 LINC00523Q86TU6 105 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 EPHX4Q8IUS5 362 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 CMTR2Q8IYT2 770 aaKnown RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 PELI3Q8N2H9 469 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 RDH11Q8TC12 318 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 MYLPFQ96A32 169 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 MRGPRX2Q96LB1 330 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 MTG1Q9BT17 334 aaPredicted RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 EPB41L1Q9H4G0 881 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SNAP29O95721 258 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 AAK1Q2M2I8 961 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 IFNLR1Q8IU57 520 aaPredicted RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SMG8Q8ND04 991 aaKnown RBP20.45■□□□□ 0.86
SSBP3-216ENST00000610401 PDZD8Q8NEN9 1154 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 OR2T34Q8NGX1 318 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 OR2T3Q8NH03 318 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 TEX37Q96LM6 180 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 SLC25A23Q9BV35 468 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 ADI1Q9BV57 179 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 TMLHEQ9NVH6 421 aa20.45■□□□□ 0.86
SSBP3-216ENST00000610401 PENKP01210 267 aaPredicted RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 HSPA8P11142 646 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 TPP2P29144 1249 aaPredicted RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 CBLBQ13191 982 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 ADNPQ9H2P0 1102 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 CXorf21Q9HAI6 301 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 EML4Q9HC35 981 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 MAP10Q9P2G4 905 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 SUCOQ9UBS9 1254 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 DNAJC15Q9Y5T4 150 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 PAPPA2Q9BXP8 1791 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 USP34Q70CQ2 3546 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 TRIM24O15164 1050 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 NCAM2O15394 837 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 PRDX3P30048 256 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 SLC10A7Q0GE19 358 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 TRAF2Q12933 501 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 AFAP1L2Q8N4X5 818 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 SARS2Q9NP81 518 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 RGS18Q9NS28 235 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 VWA7Q9Y334 891 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 ARL5AQ9Y689 179 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 MAFKO60675 156 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 ZNF182P17025 639 aaPredicted RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 PAMP19021 973 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 ELK4P28324 431 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 GGT5P36269 586 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 CLCN2P51788 898 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 GALNT3Q14435 633 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 BPIFB6Q8NFQ5 453 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 MCMBPQ9BTE3 642 aa20.44■□□□□ 0.86
SSBP3-216ENST00000610401 IPO11Q9UI26 975 aaKnown RBP20.44■□□□□ 0.86
SSBP3-216ENST00000610401 ENPP3O14638 875 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 NHSL2Q5HYW2 709 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 MIB1Q86YT6 1006 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 RNF145Q96MT1 663 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 CDK15Q96Q40 435 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 TCF12Q99081 682 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 EXD2Q9NVH0 621 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 GDAP2Q9NXN4 497 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 HTTP42858 3142 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 CDK9P50750 372 aaKnown RBP20.43■□□□□ 0.86
SSBP3-216ENST00000610401 PRKAA2P54646 552 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 GNA12Q03113 381 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 ACBD5Q5T8D3 534 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-216ENST00000610401 SNX29P2Q8IUI4 249 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms