RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CFAP161Q6P656 301 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 LINGO2Q7L985 606 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 ARHGAP12Q8IWW6 846 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SLC35F3Q8IY50 421 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SAMD14Q8IZD0 417 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 TTC39CQ8N584 583 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 ZBTB2Q8N680 514 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 BEST2Q8NFU1 509 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 HUS1BQ8NHY5 278 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 ARRDC2Q8TBH0 407 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SLITRK1Q96PX8 696 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 FTOQ9C0B1 505 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM234AQ9H0X4 552 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 TMX4Q9H1E5 349 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SYNCQ9H7C4 482 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 DDX4Q9NQI0 724 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 RRP7BPQ9NSQ0 103 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 HAUS2Q9NVX0 235 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 TMEM51Q9NW97 253 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 CISD1Q9NZ45 108 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 ABI3Q9P2A4 366 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SWAP70Q9UH65 585 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 NFE2L3Q9Y4A8 694 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM237AA0A1B0GTK4 181 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 MYO1GB0I1T2 1018 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 PTGES3LE9PB15 166 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 INSIG1O15503 277 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 SPRY3O43610 288 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NKX2-2O95096 273 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 TOMM40O96008 361 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 LCATP04180 440 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 IL7RP16871 459 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NAGAP17050 411 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 CD58P19256 250 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 RFX2P48378 723 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 PRAMEP78395 509 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NIPAL4Q0D2K0 466 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 PRKG2Q13237 762 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NAE1Q13564 534 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NEDD9Q14511 834 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 CRYMQ14894 314 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 SHBQ15464 509 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 MEA1Q16626 185 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 USP41Q3LFD5 358 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 FNBP1LQ5T0N5 605 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 KLHL35Q6PF15 583 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 QSOX2Q6ZRP7 698 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 CCDC129Q6ZRS4 1044 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 WDTC1Q8N5D0 677 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 SCCPDHQ8NBX0 429 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 TRIB2Q92519 343 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 ERGIC1Q969X5 290 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 TMEM68Q96MH6 324 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 KAT14Q9H8E8 782 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 CLK4Q9HAZ1 481 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 TERF2IPQ9NYB0 399 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 VPS28Q9UK41 221 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 FZD10Q9ULW2 581 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 CEPT1Q9Y6K0 416 aa4.4□□□□□ -1.71
SMCHD1-213ENST00000609587 A0A1B0GVM2 712 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 A0A1B0GVT2 93 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 A6NCN8 305 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 ASAP2O43150 1006 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 RGS14O43566 566 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 OAZ2O95190 189 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CRYABP02511 175 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 ALOX12P18054 663 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 TM4SF1P30408 202 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 PIGAP37287 484 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 HADHAP40939 763 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 ROR2Q01974 943 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 GPS2Q13227 327 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CTTNQ14247 550 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 HNF4GQ14541 408 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CXorf66Q5JRM2 361 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 HIST2H2BCQ6DN03 193 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 TMEM154Q6P9G4 183 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 SARM1Q6SZW1 724 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 SLC41A2Q96JW4 573 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 C1orf74Q96LT6 269 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CMTM3Q96MX0 182 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 TMEM47Q9BQJ4 181 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 C1QTNF5Q9BXJ0 243 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 SH2D4AQ9H788 454 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CNOT8Q9UFF9 292 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms