RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 DTX3LQ8TDB6 740 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 UCMAQ8WVF2 138 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ASIC4Q96FT7 647 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TSPAN17Q96FV3 270 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZNF317Q96PQ6 595 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TM6SF2Q9BZW4 377 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SUV39H2Q9H5I1 410 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 HPS4Q9NQG7 708 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 HECAQ9UBI9 543 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MID2Q9UJV3 735 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PLLPQ9Y342 182 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZNF711Q9Y462 761 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MTCH2Q9Y6C9 303 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 COMMD10Q9Y6G5 202 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CCDC189A1A4V9 331 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TPP1O14773 563 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SPAG7O75391 227 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 AHSGP02765 367 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TYK2P29597 1187 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CTSOP43234 321 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SUOXP51687 545 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ADARP55265 1226 aaKnown RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ST8SIA6P61647 398 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RUNX3Q13761 415 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 BMPR2Q13873 1038 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 HHATQ5VTY9 493 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TMEM215Q68D42 235 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TANGO2Q6ICL3 276 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 LVRNQ6Q4G3 990 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CERS6Q6ZMG9 384 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 USP45Q70EL2 814 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SDCCAG8Q86SQ7 713 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CLEC14AQ86T13 490 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PHTF2Q8N3S3 785 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TERB1Q8NA31 727 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MDGA1Q8NFP4 955 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 OR2A12Q8NGT7 310 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 OR4L1Q8NH43 312 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SUSD6Q92537 303 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 HDAC10Q969S8 669 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 VOPP1Q96AW1 172 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GRAMD1AQ96CP6 724 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SCRN2Q96FV2 425 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DNAJC1Q96KC8 554 aaKnown RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MYADMQ96S97 322 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 HEPHQ9BQS7 1158 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SNX15Q9NRS6 342 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CATSPERZQ9NTU4 200 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ELOVL2Q9NXB9 296 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 NFKBIL1Q9UBC1 381 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SPO11Q9Y5K1 396 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ARL5AQ9Y689 179 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PIKFYVEQ9Y2I7 2098 aa12.31□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 LRRK1Q38SD2 2015 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 A0A087X1B8 175 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 STX7O15400 261 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CD3EAPO15446 510 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 S1PR4O95977 384 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GOT2P00505 430 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ARSAP15289 507 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZNF30P17039 623 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GABRB3P28472 473 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PPARGP37231 505 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TTPAP49638 278 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ARSDP51689 593 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 STC1P52823 247 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PDE1CQ14123 709 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PTPRNQ16849 979 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TSNAXIP1Q2TAA8 658 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DPY19L3Q6ZPD9 716 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TPRG1Q6ZUI0 275 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CAMK1DQ8IU85 385 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 STK40Q8N2I9 435 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 OR6P1Q8NGX9 317 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RDH11Q8TC12 318 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 BCAS4Q8TDM0 211 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RPL10LQ96L21 214 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CDH19Q9H159 772 aa12.3□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 EBF3Q9H4W6 596 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms