RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 H0YJX3 145 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MARCKSL1P49006 195 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SLC7A2P52569 658 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 AP1S2P56377 157 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MXD1Q05195 221 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SCN1BQ07699 218 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MPP2Q14168 576 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 LY6KQ17RY6 165 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CXorf57Q6NSI4 855 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PALB2Q86YC2 1186 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 AGBL3Q8NEM8 1001 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF606Q8WXB4 792 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 BAP1Q92560 729 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 TBCBQ99426 244 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ADI1Q9BV57 179 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SLITRK2Q9H156 845 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SACM1LQ9NTJ5 587 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RPL26L1Q9UNX3 145 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MYO7AQ13402 2215 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 STX11O75558 287 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CLYBLQ8N0X4 340 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 C12orf65Q9H3J6 166 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 DNAJC18Q9H819 358 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 LRRC4BQ9NT99 713 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MAFFQ9ULX9 164 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 NUP214P35658 2090 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 TRIM64A6NGJ6 449 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 TRIM64BA6NI03 449 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 UMPSP11172 480 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 COX7A2P14406 83 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CD40LGP29965 261 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PLEKHH3Q7Z736 793 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SMYD1Q8NB12 490 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RSPH9Q9H1X1 276 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 FBXO44Q9H4M3 255 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 INVSQ9Y283 1065 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PLATP00750 562 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SNRPB2P08579 225 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RPS12P25398 132 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PGM5Q15124 567 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MILR1Q7Z6M3 343 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PEG10Q86TG7 708 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ARMC8Q8IUR7 673 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 EIF1ADQ8N9N8 165 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 EPB41L4BQ9H329 900 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SEMA4BQ9NPR2 832 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 LTN1O94822 1766 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 FMO3P31513 532 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RPL35P42766 123 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ANKRD13AQ8IZ07 590 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF366Q8N895 744 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MAB21L3Q8N8X9 362 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ADCY4Q8NFM4 1077 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ZDHHC15Q96MV8 337 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RTKNQ9BST9 563 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PPIEQ9UNP9 301 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CNTNAP4Q9C0A0 1308 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 H3BSA7 217 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MIPP30301 263 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MTHFRP42898 656 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RALGPS1Q5JS13 557 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PRR23BQ6ZRT6 265 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 POMGNT2Q8NAT1 580 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 TRAPPC12Q8WVT3 735 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ATP13A1Q9HD20 1204 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ARL15Q9NXU5 204 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 KCNH1O95259 989 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ITIH1P19827 911 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PSMB4P28070 264 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 S100A3P33764 101 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ERI1Q8IV48 349 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 LRTOMTQ8WZ04 291 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 TRIM43Q96BQ3 446 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 METTL18O95568 372 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CST1P01037 141 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 CALCAP01258 141 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RPA4Q13156 261 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SCIMPQ6UWF3 145 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 P2RY8Q86VZ1 359 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 C12orf50Q8NA57 414 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 MOSPD2Q8NHP6 518 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SMG7Q92540 1137 aaKnown RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 RASSF1Q9NS23 344 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 A0A087X1B8 175 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 M0QX08 132 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 NARSO43776 548 aaKnown RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 OXSR1O95747 527 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 TSPAN8P19075 237 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 RXRGP48443 463 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 PPP4CP60510 307 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 CYP20A1Q6UW02 462 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms