RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SPACA7Q96KW9 195 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 RUNDC3BQ96NL0 473 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 PPP1R2P1Q96PQ5 205 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 KRT12Q99456 494 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 BTBD1Q9H0C5 482 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 PCDH12Q9NPG4 1184 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 PHTF1Q9UMS5 762 aa18.94■□□□□ 0.62
CCDC9-205ENST00000600117 RPL26L1Q9UNX3 145 aaKnown RBP18.94■□□□□ 0.62
CCDC9-205ENST00000600117 AAR2Q9Y312 384 aaKnown RBP18.94■□□□□ 0.62
CCDC9-205ENST00000600117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.93■□□□□ 0.62
CCDC9-205ENST00000600117 AP1G1O43747 822 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 NDST3O95803 873 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 GAS8O95995 478 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 EPOP01588 193 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 ATXN1LP0C7T5 689 aaKnown RBP18.93■□□□□ 0.62
CCDC9-205ENST00000600117 SUOXP51687 545 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 CCDC15Q0P6D6 951 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 SEMA5AQ13591 1074 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 QPCTQ16769 361 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 LPCAT1Q8NF37 534 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 IPMKQ8NFU5 416 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 OR14C36Q8NHC7 312 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 SMIM14Q96QK8 99 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 MCCC1Q96RQ3 725 aaPredicted RBP18.93■□□□□ 0.62
CCDC9-205ENST00000600117 RAB6BQ9NRW1 208 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 GGT7Q9UJ14 662 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 ITM2BQ9Y287 266 aa18.93■□□□□ 0.62
CCDC9-205ENST00000600117 TAF4O00268 1085 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 RIOK3O14730 519 aaKnown RBP18.92■□□□□ 0.62
CCDC9-205ENST00000600117 SEMA4FO95754 770 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 MMP12P39900 470 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 VPS41P49754 854 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 POLR2LP62875 67 aaKnown RBP18.92■□□□□ 0.62
CCDC9-205ENST00000600117 DR1Q01658 176 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 OLIG2Q13516 323 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 PTK6Q13882 451 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 PTPRRQ15256 657 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 PMS2CLQ68D20 193 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 KDELC2Q7Z4H8 507 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 JAMLQ86YT9 394 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 PAF1Q8N7H5 531 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 FICDQ9BVA6 458 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 KDM4CQ9H3R0 1056 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 MSRB2Q9Y3D2 182 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 ACACAQ13085 2346 aa18.92■□□□□ 0.62
CCDC9-205ENST00000600117 A0A0J9YYE9 177 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 TTI1O43156 1089 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 PSMD3O43242 534 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 AP2A1O95782 977 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 AGTP01019 485 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 TRBC1P01850 177 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 CTPS1P17812 591 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 XPAP23025 273 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-205ENST00000600117 CHRNA4P43681 627 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 GRIA4P48058 902 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 SEMG2Q02383 582 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 RALGDSQ12967 914 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 GPS1Q13098 491 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 DHX34Q14147 1143 aaKnown RBP18.91■□□□□ 0.62
CCDC9-205ENST00000600117 GALNT3Q14435 633 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 SPARCL1Q14515 664 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 TMEM52BQ4KMG9 183 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 RANBP10Q6VN20 620 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 SLC36A4Q6YBV0 504 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 SYDE1Q6ZW31 735 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-205ENST00000600117 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 PDCD7Q8N8D1 485 aaKnown RBP18.91■□□□□ 0.62
CCDC9-205ENST00000600117 DEFB124Q8NES8 71 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 OR2T34Q8NGX1 318 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 IFT43Q96FT9 208 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 SCRN2Q96FV2 425 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 GPR174Q9BXC1 333 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 ADGRE3Q9BY15 652 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 PREBQ9HCU5 417 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 B4GALT6Q9UBX8 382 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 ADAMTS20P59510 1910 aa18.91■□□□□ 0.62
CCDC9-205ENST00000600117 GOLGA6CA6NDK9 693 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 GOLGA6BA6NDN3 693 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ANKRD66B4E2M5 251 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 HYAL3O43820 417 aaPredicted RBP18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ALPIP09923 528 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 GOLGA6DP0CG33 693 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 HLA-DPA1P20036 260 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 EPHB1P54762 984 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ELP6Q0PNE2 266 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 PPP1R7Q15435 360 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 SLC1A5Q15758 541 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 UAP1L1Q3KQV9 507 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 SIRPB2Q5JXA9 342 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 DENND5AQ6IQ26 1287 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ERAP2Q6P179 960 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 CYP2U1Q7Z449 544 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 LYSMD1Q96S90 227 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 TBL1YQ9BQ87 522 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 APOL2Q9BQE5 337 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 TRIM51Q9BSJ1 452 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 FSD1LQ9BXM9 530 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 PCED1AQ9H1Q7 454 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 C6orf106Q9H6K1 298 aaPredicted RBP18.9■□□□□ 0.62
CCDC9-205ENST00000600117 LRRC40Q9H9A6 602 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms