RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SH3RF2Q8TEC5 729 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 STYXQ8WUJ0 223 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 PEX13Q92968 403 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 EBF4Q9BQW3 602 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 YY1AP1Q9H869 796 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 PNPOQ9NVS9 261 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 OXSMQ9NWU1 459 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 MTF2Q9Y483 593 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 ARIH1Q9Y4X5 557 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 LEFTY2O00292 366 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 TRIM13O60858 407 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 RFPL2O75678 378 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 KLHL2O95198 593 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 PRSS56P0CW18 603 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 CES1P23141 567 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC8A1P32418 973 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 INO80DQ53TQ3 878 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 ATXN7L2Q5T6C5 722 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 HECTD2Q5U5R9 776 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 NCEH1Q6PIU2 408 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 MAVSQ7Z434 540 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 MICAL1Q8TDZ2 1067 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 TCEAL4Q96EI5 215 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 TSNARE1Q96NA8 513 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 GATA5Q9BWX5 397 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 IGSF5Q9NSI5 407 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 TXLNGQ9NUQ3 528 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 XPR1Q9UBH6 696 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 CCL26Q9Y258 94 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 MYO7AQ13402 2215 aa17.09■□□□□ 0.33
SHKBP1-216ENST00000598201 CD3EAPO15446 510 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 GLP2RO95838 553 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 APOA4P06727 396 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 NQO1P15559 274 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 CLCN4P51793 760 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC12A2P55011 1212 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 CDKN2DP55273 166 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 NSUN2Q08J23 767 aaKnown RBP eCLIP17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 LAMB3Q13751 1172 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 SPDYAQ5MJ70 313 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 PPM1LQ5SGD2 360 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 LCA5Q86VQ0 697 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 CPXM2Q8N436 756 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 DCAF4L2Q8NA75 395 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 RIN3Q8TB24 985 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 HEXDCQ8WVB3 486 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 CDKN2AIPNLQ96HQ2 116 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 NMUR2Q9GZQ4 415 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 ARHGEF3Q9NR81 526 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 CRYL1Q9Y2S2 319 aa17.08■□□□□ 0.33
SHKBP1-216ENST00000598201 A0A087X1B8 175 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 A0A0U1RQS6 177 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 CFAP73A6NFT4 308 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 FCHO1O14526 889 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 SLC4A1P02730 911 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 RHOAP61586 193 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 GLT6D1Q7Z4J2 308 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 LMNTD2Q8IXW0 634 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 OR4K2Q8NGD2 314 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 GPR150Q8NGU9 434 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 RDH11Q8TC12 318 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 SLC7A6OSQ96CW6 309 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 GCNAQ96QF7 691 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 LMAN2LQ9H0V9 348 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 NLE1Q9NVX2 485 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-216ENST00000598201 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 SMAD6O43541 496 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 CRTAMO95727 393 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 BMP1P13497 986 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 IRS1P35568 1242 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 ELF3P78545 371 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 LMAN2Q12907 356 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 CSHL1Q14406 222 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 TAF1AQ15573 450 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 ZNF549Q6P9A3 640 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 OR4L1Q8NH43 312 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 WWP1Q9H0M0 922 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 VWA7Q9Y334 891 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 TRANK1O15050 2925 aa17.07■□□□□ 0.32
SHKBP1-216ENST00000598201 DLX3O60479 287 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 MOSPD3O75425 235 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 KRT16P08779 473 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 CD70P32970 193 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 ABL2P42684 1182 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 CCR10P46092 362 aa17.06■□□□□ 0.32
SHKBP1-216ENST00000598201 TTC31Q49AM3 519 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms