RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CA5AP35218 305 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 FDFT1P37268 417 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 GRIA4P48058 902 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 STC1P52823 247 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 RPS21P63220 83 aaKnown RBP10.59□□□□□ -0.71
LIG1-210ENST00000596332 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 PTK6Q13882 451 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 KCNJ11Q14654 390 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 PTPRCAPQ14761 206 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 TRADDQ15628 312 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 WSCD2Q2TBF2 565 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 TPRG1LQ5T0D9 272 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 LRRC66Q68CR7 880 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 KIAA1161Q6NSJ0 714 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 GCNT7Q6ZNI0 430 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 ARHGEF18Q6ZSZ5 1173 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 CEP68Q76N32 757 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 C11orf74Q86VG3 221 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 KLHL7Q8IXQ5 586 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 SLC25A41Q8N5S1 370 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 NAT8LQ8N9F0 302 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 PLA2G15Q8NCC3 412 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 LRRN4CLQ8ND94 238 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 LOXL4Q96JB6 756 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 KRT12Q99456 494 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 IRF2BPLQ9H1B7 796 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 PARD6AQ9NPB6 346 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 CASS4Q9NQ75 786 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 GPR27Q9NS67 375 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 AAR2Q9Y312 384 aaKnown RBP10.59□□□□□ -0.71
LIG1-210ENST00000596332 KCTD3Q9Y597 815 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 LAMA1P25391 3075 aa10.59□□□□□ -0.71
LIG1-210ENST00000596332 SDK1Q7Z5N4 2213 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ZNF292O60281 2723 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 THADAQ6YHU6 1953 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 POM121BA6NF01 834 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ESPNB1AK53 854 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 H0Y8X5 98 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 K7ESM1 405 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 KIF2AO00139 706 aaPredicted RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 SLC31A1O15431 190 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 RAD51CO43502 376 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 LDB2O43679 373 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 NDUFS2O75306 463 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 NEBLO76041 1014 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 RECQL5O94762 991 aaPredicted RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 STK10O94804 968 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 RHOBTB1O94844 696 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TMEM63AO94886 807 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 PCDH8O95206 1070 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TPH1P17752 444 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 IGFALSP35858 605 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ETV3P41162 512 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 PAFAH1B1P43034 410 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 DHPSP49366 369 aaPredicted RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 CCDC15Q0P6D6 951 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ELP6Q0PNE2 266 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 GPS1Q13098 491 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 RNASEH2BQ5TBB1 312 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 LYSMD4Q5XG99 296 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ZC3H14Q6PJT7 736 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 PRR23BQ6ZRT6 265 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 Q6ZVL8 140 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 CAND1Q86VP6 1230 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 JAMLQ86YT9 394 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 DCLK2Q8N568 766 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 NOA1Q8NC60 698 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 GPR26Q8NDV2 337 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 OR52K1Q8NGK4 314 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ZNF592Q92610 1267 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TBL1YQ9BQ87 522 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TRIM51Q9BSJ1 452 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ABCG8Q9H221 673 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 SEMA4AQ9H3S1 761 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 L2HGDHQ9H9P8 463 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 CAPN10Q9HC96 672 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TM9SF3Q9HD45 589 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 FZD3Q9NPG1 666 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 EIF2B3Q9NR50 452 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 PIH1D1Q9NWS0 290 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 IL17CQ9P0M4 197 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 TMPRSS11EQ9UL52 423 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 PNMA8BQ9ULN7 279 aaPredicted RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 SHOC2Q9UQ13 582 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 BPTFQ12830 3046 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 CEP192Q8TEP8 1941 aa10.58□□□□□ -0.72
LIG1-210ENST00000596332 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.72
LIG1-210ENST00000596332 PLXNA2O75051 1894 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 GON4LQ3T8J9 2241 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
LIG1-210ENST00000596332 TM7SF2O76062 418 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms