RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SPASTQ9UBP0 616 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 U3KQA8 63 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 LRP4O75096 1905 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 RCCD1A6NED2 376 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 JCHAINP01591 159 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 KRT1P04264 644 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 CYP2A6P11509 494 aaPredicted RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 LHCGRP22888 699 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 NR2C2P49116 596 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 BLKP51451 505 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 RPL26P61254 145 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 DSC2Q02487 901 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 PPARDQ03181 441 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 CAMK2BQ13554 666 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 PDK1Q15118 436 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 CNGA3Q16281 694 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 RAVER1Q8IY67 606 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 PHACTR4Q8IZ21 702 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 CCNYQ8ND76 341 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 PDCD6IPQ8WUM4 868 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 RPL26L1Q9UNX3 145 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 TFR2Q9UP52 801 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 REXO2Q9Y3B8 237 aaKnown RBP13.08□□□□□ -0.32
USE1-207ENST00000596136 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.32
USE1-207ENST00000596136 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 A8MX80 341 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 LMO7DNF2Z398 122 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TNFRSF10CO14798 259 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 FFAR2O15552 330 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 PJA2O43164 708 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 GCATO75600 419 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NEBLO76041 1014 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TRBC1P01850 177 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 MMP2P08253 660 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 HTR1BP28222 390 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TEAD1P28347 426 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 CDC25BP30305 580 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 HK3P52790 923 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 DPTQ07507 201 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ITKQ08881 620 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ZBTB17Q13105 803 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TFDP2Q14188 446 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ALG11Q2TAA5 492 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 RAD9BQ6WBX8 426 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 SPOCD1Q6ZMY3 1216 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 USP45Q70EL2 814 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TECPR1Q7Z6L1 1165 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NLRP8Q86W28 1048 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TMEM139Q8IV31 216 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 RBFAQ8N0V3 343 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NDUFAF2Q8N183 169 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ATL2Q8NHH9 583 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 FUBP1Q96AE4 644 aaKnown RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 DTD2Q96FN9 168 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 APOLD1Q96LR9 279 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 LYSMD1Q96S90 227 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 LRRC61Q9BV99 259 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 BOCQ9BWV1 1114 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 SLC13A1Q9BZW2 595 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 CLPBQ9H078 707 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 GOLPH3Q9H4A6 298 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 NCKIPSDQ9NZQ3 722 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 APOBEC3BQ9UH17 382 aaKnown RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 OR1A2Q9Y585 309 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 DGKBQ9Y6T7 804 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
USE1-207ENST00000596136 ACACAQ13085 2346 aa13.07□□□□□ -0.32
USE1-207ENST00000596136 MYLKQ15746 1914 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 RP1P56715 2156 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 KCNK1O00180 336 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
USE1-207ENST00000596136 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.32
USE1-207ENST00000596136 PCCBP05166 539 aa13.06□□□□□ -0.32
USE1-207ENST00000596136 GP1BAP07359 652 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms