RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 RXRGP48443 463 aa15.07■□□□□ 0
UPF1-202ENST00000594243 PFN3P60673 137 aa15.07■□□□□ 0
UPF1-202ENST00000594243 KLF1Q13351 362 aaPredicted RBP15.07■□□□□ 0
UPF1-202ENST00000594243 PTK2BQ14289 1009 aa15.07■□□□□ 0
UPF1-202ENST00000594243 ACOX1Q15067 660 aa15.07■□□□□ 0
UPF1-202ENST00000594243 PRAMEF14Q5SWL7 426 aa15.07■□□□□ 0
UPF1-202ENST00000594243 CCDC70Q6NSX1 233 aa15.07■□□□□ 0
UPF1-202ENST00000594243 DBX2Q6ZNG2 339 aa15.07■□□□□ 0
UPF1-202ENST00000594243 PTAR1Q7Z6K3 402 aaPredicted RBP15.07■□□□□ 0
UPF1-202ENST00000594243 ZNF567Q8N184 647 aa15.07■□□□□ 0
UPF1-202ENST00000594243 TADA1Q96BN2 335 aa15.07■□□□□ 0
UPF1-202ENST00000594243 IFT43Q96FT9 208 aa15.07■□□□□ 0
UPF1-202ENST00000594243 CARD9Q9H257 536 aa15.07■□□□□ 0
UPF1-202ENST00000594243 MBNL1Q9NR56 388 aaKnown RBP15.07■□□□□ 0
UPF1-202ENST00000594243 FNDC3AQ9Y2H6 1198 aaKnown RBP15.07■□□□□ 0
UPF1-202ENST00000594243 NPIPB15A6NHN6 443 aaPredicted RBP15.06■□□□□ 0
UPF1-202ENST00000594243 KCNN4O15554 427 aa15.06■□□□□ 0
UPF1-202ENST00000594243 FLRT2O43155 660 aa15.06■□□□□ 0
UPF1-202ENST00000594243 PCDHGA12O60330 932 aa15.06■□□□□ 0
UPF1-202ENST00000594243 ALPIP09923 528 aa15.06■□□□□ 0
UPF1-202ENST00000594243 CEACAM1P13688 526 aa15.06■□□□□ 0
UPF1-202ENST00000594243 TNNT3P45378 269 aaPredicted RBP15.06■□□□□ 0
UPF1-202ENST00000594243 THOP1P52888 689 aa15.06■□□□□ 0
UPF1-202ENST00000594243 CDK18Q07002 472 aa15.06■□□□□ 0
UPF1-202ENST00000594243 CNGA3Q16281 694 aa15.06■□□□□ 0
UPF1-202ENST00000594243 WSCD2Q2TBF2 565 aa15.06■□□□□ 0
UPF1-202ENST00000594243 ITPRIPL1Q6GPH6 555 aa15.06■□□□□ 0
UPF1-202ENST00000594243 PIP4P1Q86T03 277 aa15.06■□□□□ 0
UPF1-202ENST00000594243 RAVER1Q8IY67 606 aaKnown RBP15.06■□□□□ 0
UPF1-202ENST00000594243 CBARPQ8N350 705 aaPredicted RBP15.06■□□□□ 0
UPF1-202ENST00000594243 LPCAT1Q8NF37 534 aa15.06■□□□□ 0
UPF1-202ENST00000594243 SPATA22Q8NHS9 363 aa15.06■□□□□ 0
UPF1-202ENST00000594243 FCRL5Q96RD9 977 aa15.06■□□□□ 0
UPF1-202ENST00000594243 MLPHQ9BV36 600 aaPredicted RBP15.06■□□□□ 0
UPF1-202ENST00000594243 KCNF1Q9H3M0 494 aa15.06■□□□□ 0
UPF1-202ENST00000594243 GPR27Q9NS67 375 aa15.06■□□□□ 0
UPF1-202ENST00000594243 FAM153AQ9UHL3 310 aa15.06■□□□□ 0
UPF1-202ENST00000594243 ANKRD36A6QL64 1941 aa15.05■□□□□ 0
UPF1-202ENST00000594243 SPTY2D1-AS1A0A0U1RR47 76 aa15.05■□□□□ -0
UPF1-202ENST00000594243 KCNK5O95279 499 aa15.05■□□□□ -0
UPF1-202ENST00000594243 MT-CYBP00156 380 aaPredicted RBP15.05■□□□□ -0
UPF1-202ENST00000594243 ITGAVP06756 1048 aa15.05■□□□□ -0
UPF1-202ENST00000594243 NFKB1P19838 968 aa15.05■□□□□ -0
UPF1-202ENST00000594243 CD68P34810 354 aaPredicted RBP15.05■□□□□ -0
UPF1-202ENST00000594243 IGFALSP35858 605 aa15.05■□□□□ -0
UPF1-202ENST00000594243 MTM1Q13496 603 aa15.05■□□□□ -0
UPF1-202ENST00000594243 PDE1CQ14123 709 aaPredicted RBP15.05■□□□□ -0
UPF1-202ENST00000594243 INPP5AQ14642 412 aa15.05■□□□□ -0
UPF1-202ENST00000594243 IRF4Q15306 451 aa15.05■□□□□ -0
UPF1-202ENST00000594243 PCSK7Q16549 785 aa15.05■□□□□ -0
UPF1-202ENST00000594243 INAVAQ3KP66 663 aa15.05■□□□□ -0
UPF1-202ENST00000594243 FAM182AQ5T1J6 154 aa15.05■□□□□ -0
UPF1-202ENST00000594243 DENND2CQ68D51 928 aa15.05■□□□□ -0
UPF1-202ENST00000594243 CRTC1Q6UUV9 634 aa15.05■□□□□ -0
UPF1-202ENST00000594243 ERMP1Q7Z2K6 904 aa15.05■□□□□ -0
UPF1-202ENST00000594243 NAXDQ8IW45 347 aa15.05■□□□□ -0
UPF1-202ENST00000594243 SLC22A18ASQ8N1D0 253 aa15.05■□□□□ -0
UPF1-202ENST00000594243 SETD7Q8WTS6 366 aaKnown RBP15.05■□□□□ -0
UPF1-202ENST00000594243 COQ10AQ96MF6 247 aa15.05■□□□□ -0
UPF1-202ENST00000594243 LYSMD1Q96S90 227 aa15.05■□□□□ -0
UPF1-202ENST00000594243 SRPK1Q96SB4 655 aaKnown RBP15.05■□□□□ -0
UPF1-202ENST00000594243 FAM118BQ9BPY3 351 aa15.05■□□□□ -0
UPF1-202ENST00000594243 FRMD8P1Q9BZ68 369 aaPredicted RBP15.05■□□□□ -0
UPF1-202ENST00000594243 C10orf88Q9H8K7 445 aa15.05■□□□□ -0
UPF1-202ENST00000594243 RSPH14Q9UHP6 348 aa15.05■□□□□ -0
UPF1-202ENST00000594243 CAPN8A6NHC0 703 aa15.04■□□□□ -0
UPF1-202ENST00000594243 SH3BP5O60239 455 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PMPCBO75439 489 aa15.04■□□□□ -0
UPF1-202ENST00000594243 EPOP01588 193 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PCCBP05166 539 aa15.04■□□□□ -0
UPF1-202ENST00000594243 LHCGRP22888 699 aa15.04■□□□□ -0
UPF1-202ENST00000594243 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
UPF1-202ENST00000594243 HTR1BP28222 390 aa15.04■□□□□ -0
UPF1-202ENST00000594243 GRK6P43250 576 aa15.04■□□□□ -0
UPF1-202ENST00000594243 NOVA1P51513 510 aaKnown RBP15.04■□□□□ -0
UPF1-202ENST00000594243 IL9RQ01113 521 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PTSQ03393 145 aa15.04■□□□□ -0
UPF1-202ENST00000594243 MPP3Q13368 585 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PRPSAP1Q14558 356 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PTPRRQ15256 657 aa15.04■□□□□ -0
UPF1-202ENST00000594243 SHBQ15464 509 aa15.04■□□□□ -0
UPF1-202ENST00000594243 QPCTQ16769 361 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PPM1JQ5JR12 505 aa15.04■□□□□ -0
UPF1-202ENST00000594243 ANKRD20A2Q5SQ80 823 aa15.04■□□□□ -0
UPF1-202ENST00000594243 ANKRD20A1Q5TYW2 823 aa15.04■□□□□ -0
UPF1-202ENST00000594243 ANKRD20A3Q5VUR7 823 aa15.04■□□□□ -0
UPF1-202ENST00000594243 LRRC66Q68CR7 880 aa15.04■□□□□ -0
UPF1-202ENST00000594243 KDELC2Q7Z4H8 507 aa15.04■□□□□ -0
UPF1-202ENST00000594243 TSPAN33Q86UF1 283 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PARGQ86W56 976 aa15.04■□□□□ -0
UPF1-202ENST00000594243 SLC13A5Q86YT5 568 aaPredicted RBP15.04■□□□□ -0
UPF1-202ENST00000594243 REXO1L1PQ8IX06 675 aa15.04■□□□□ -0
UPF1-202ENST00000594243 DEFB124Q8NES8 71 aa15.04■□□□□ -0
UPF1-202ENST00000594243 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
UPF1-202ENST00000594243 RHBDD1Q8TEB9 315 aa15.04■□□□□ -0
UPF1-202ENST00000594243 SAP25Q8TEE9 199 aa15.04■□□□□ -0
UPF1-202ENST00000594243 MAIP1Q8WWC4 291 aa15.04■□□□□ -0
UPF1-202ENST00000594243 NUS1Q96E22 293 aa15.04■□□□□ -0
UPF1-202ENST00000594243 PPP1R2P1Q96PQ5 205 aa15.04■□□□□ -0
UPF1-202ENST00000594243 TRIB3Q96RU7 358 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms