RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LACRTQ9GZZ8 138 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 NLGN3Q9NZ94 848 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 OR1A2Q9Y585 309 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 A0A0U1RQS6 177 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 NEMP2A6NFY4 417 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 H3BM21 787 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 K7ESM1 405 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 GCATO75600 419 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 MMP2P08253 660 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 C1SP09871 688 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 KRT10P13645 584 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 CDC25BP30305 580 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 TRIM23P36406 574 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 DYNLT1P63172 113 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 ADCY2Q08462 1091 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 MTM1Q13496 603 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 PDK1Q15118 436 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 LLGL1Q15334 1064 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 SMAD1Q15797 465 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 SPOCD1Q6ZMY3 1216 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 NYAP1Q6ZVC0 841 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 TSPAN33Q86UF1 283 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 KATNAL2Q8IYT4 538 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 PHACTR4Q8IZ21 702 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 RBFAQ8N0V3 343 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 KRT35Q92764 455 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 SAE1Q9UBE0 346 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 TTLL3Q9Y4R7 772 aa18.53■□□□□ 0.56
SHKBP1-202ENST00000593764 LY6G6EA0A0G2JKS1 128 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 BTNL10A8MVZ5 291 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 AQP9O43315 295 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 RFPL3O75679 317 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 PROS1P07225 676 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 ALPIP09923 528 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 CTPS1P17812 591 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 ACP1P24666 158 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 HNF1BP35680 557 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 AP1B1Q10567 949 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 NFATC4Q14934 902 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 ACOX1Q15067 660 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 KCTD16Q68DU8 428 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 HSD11B1LQ7Z5J1 315 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 DAAM2Q86T65 1068 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 MARCH9Q86YJ5 346 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 FAM181AQ8N9Y4 354 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 ACRBPQ8NEB7 543 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 BTN2A2Q8WVV5 523 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 TBATAQ96M53 351 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 BAG1Q99933 345 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 TDRD1Q9BXT4 1180 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 IMPACTQ9P2X3 320 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 CHKBQ9Y259 395 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 U3KQA8 63 aa18.52■□□□□ 0.56
SHKBP1-202ENST00000593764 USP24Q9UPU5 2620 aa18.52■□□□□ 0.55
SHKBP1-202ENST00000593764 A0A0J9YYE9 177 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 PJA2O43164 708 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 CST8O60676 142 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 ZRANB2O95218 330 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 TRBC1P01850 177 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 CYP2A6P11509 494 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 MYF5P13349 255 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 NFKBIAP25963 317 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 NR2C2P49116 596 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 PPARDQ03181 441 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 C1orf61Q13536 156 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 ALG11Q2TAA5 492 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 PRRT3Q5FWE3 981 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 TFDP3Q5H9I0 405 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 FAXCQ5TGI0 409 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 ESRP1Q6NXG1 681 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 PNCKQ6P2M8 343 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 CRTC1Q6UUV9 634 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 ENPP7Q6UWV6 458 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 USP45Q70EL2 814 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 RCOR2Q8IZ40 523 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 LMX1AQ8TE12 382 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 TSACCQ96A04 125 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 FUBP1Q96AE4 644 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 APOLD1Q96LR9 279 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 LRRC61Q9BV99 259 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 DUSP23Q9BVJ7 150 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 CEP41Q9BYV8 373 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 CLPBQ9H078 707 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 BRD8Q9H0E9 1235 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 HAUS2Q9NVX0 235 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 SPASTQ9UBP0 616 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 APOBEC3BQ9UH17 382 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 ZZEF1O43149 2961 aa18.51■□□□□ 0.55
SHKBP1-202ENST00000593764 hCG_1818297A0A087WSY0 165 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 PSMD11O00231 422 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 TPP1O14773 563 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 CAPNS1P04632 268 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms