RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 PHF19Q5T6S3 580 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 SPECC1LQ69YQ0 1117 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 DCUN1D2Q6PH85 259 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 ARHGAP36Q6ZRI8 547 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 USP7Q93009 1102 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 NSMCE3Q96MG7 304 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 ARHGAP9Q9BRR9 750 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 FAM117AQ9C073 453 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 SEMA6CQ9H3T2 930 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
RETREG3-212ENST00000593251 FANCLQ9NW38 375 aa17.54■□□□□ 0.4
RETREG3-212ENST00000593251 HEMK1Q9Y5R4 338 aaPredicted RBP17.54■□□□□ 0.4
RETREG3-212ENST00000593251 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 TTC24A2A3L6 582 aaPredicted RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 DFFAO00273 331 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 WT1P19544 449 aaPredicted RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 CSNK1DP48730 415 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 COPB1P53618 953 aaKnown RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 BCL2L1Q07817 233 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 ACOX1Q15067 660 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 CT47A1Q5JQC4 288 aaPredicted RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 MANEAQ5SRI9 462 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 DPPA4Q7L190 304 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 SLITRK4Q8IW52 837 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 MCOLN2Q8IZK6 566 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 CINPQ9BW66 212 aaPredicted RBP17.53■□□□□ 0.4
RETREG3-212ENST00000593251 SP110Q9HB58 689 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 RDH14Q9HBH5 336 aa17.53■□□□□ 0.4
RETREG3-212ENST00000593251 CFAP69A5D8W1 941 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 C9orf172C9J069 976 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 ATMINO43313 823 aaPredicted RBP17.52■□□□□ 0.4
RETREG3-212ENST00000593251 FAM87AP0C7U9 286 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PNLIPP16233 465 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 KELP23276 732 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 TRIM23P36406 574 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 SCNN1BP51168 640 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 MAZP56270 477 aaKnown RBP17.52■□□□□ 0.4
RETREG3-212ENST00000593251 CYP4F2P78329 520 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 C16orf72Q14CZ0 275 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 AMZ1Q400G9 498 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 AFMIDQ63HM1 303 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PNCKQ6P2M8 343 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 ARHGAP12Q8IWW6 846 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 TP53INP2Q8IXH6 220 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PEBP4Q96S96 227 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 KCTD15Q96SI1 283 aaPredicted RBP17.52■□□□□ 0.4
RETREG3-212ENST00000593251 CMKLR1Q99788 373 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 WDR26Q9H7D7 661 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 SPATS2LQ9NUQ6 558 aaKnown RBP17.52■□□□□ 0.4
RETREG3-212ENST00000593251 TAS2R14Q9NYV8 317 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 CHMP5Q9NZZ3 219 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 SEPT10Q9P0V9 454 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PCSK1NQ9UHG2 260 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PCDHGA4Q9Y5G9 962 aa17.52■□□□□ 0.4
RETREG3-212ENST00000593251 PRSS38A1L453 326 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 TRAFD1O14545 582 aaPredicted RBP17.51■□□□□ 0.39
RETREG3-212ENST00000593251 TNFRSF10CO14798 259 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 DAPK3O43293 454 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 B4GAT1O43505 415 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 NUDT21O43809 227 aaKnown RBP17.51■□□□□ 0.39
RETREG3-212ENST00000593251 ERCC2P18074 760 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 PSMA2P25787 234 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 HTR7P34969 479 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 OR1D5P58170 312 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 B4GALNT1Q00973 533 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 DENND2CQ68D51 928 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 ACAD10Q6JQN1 1059 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 ARFGAP1Q8N6T3 406 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 NPWQ8N729 165 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 JPH3Q8WXH2 748 aaPredicted RBP17.51■□□□□ 0.39
RETREG3-212ENST00000593251 SNRNP25Q9BV90 132 aaKnown RBP17.51■□□□□ 0.39
RETREG3-212ENST00000593251 CARS2Q9HA77 564 aaKnown RBP17.51■□□□□ 0.39
RETREG3-212ENST00000593251 B4GALT6Q9UBX8 382 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 BSNQ9UPA5 3926 aa17.51■□□□□ 0.39
RETREG3-212ENST00000593251 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 FUCA1P04066 466 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 ITGB2P05107 769 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 HOXC4P09017 264 aaPredicted RBP17.5■□□□□ 0.39
RETREG3-212ENST00000593251 CCL4P13236 92 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 DESP17661 470 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 ALDH4A1P30038 563 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 POLR2LP62875 67 aaKnown RBP17.5■□□□□ 0.39
RETREG3-212ENST00000593251 UBXN1Q04323 297 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 PPP6R3Q5H9R7 873 aaPredicted RBP17.5■□□□□ 0.39
RETREG3-212ENST00000593251 ERMARDQ5T6L9 678 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 NRROSQ86YC3 692 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 RCBTB1Q8NDN9 531 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 ZDHHC1Q8WTX9 485 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 PTCD2Q8WV60 388 aaKnown RBP17.5■□□□□ 0.39
RETREG3-212ENST00000593251 TMEM159Q96B96 161 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 NUS1Q96E22 293 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 COQ10AQ96MF6 247 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 NUDT22Q9BRQ3 303 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 DONSONQ9NYP3 566 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 HECTD1Q9ULT8 2610 aa17.5■□□□□ 0.39
RETREG3-212ENST00000593251 LGALS16A8MUM7 142 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms