RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 PRAMEF11O60813 436 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 ELFN1P0C7U0 828 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 TNFAIP3P21580 790 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 NSFP46459 744 aaKnown RBP11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 POLD2P49005 469 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 KIAA1024LP59773 190 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 TPI1P60174 286 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 UBE2HP62256 183 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 TLE1Q04724 770 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 SRSF1Q07955 248 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 ARHGEF7Q14155 803 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 ACOX1Q15067 660 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 SKIDA1Q1XH10 827 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CLEC16AQ2KHT3 1053 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 PARP15Q460N3 678 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 SLC30A9Q6PML9 568 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 ATG14Q6ZNE5 492 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 RFLNAQ6ZTI6 216 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 MON1BQ7L1V2 547 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 SRLQ86TD4 932 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 UMODL1-AS1Q8N2C9 162 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 PAF1Q8N7H5 531 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CASKIN2Q8WXE0 1202 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CCDC74BQ96LY2 380 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 SMIM14Q96QK8 99 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 PEBP4Q96S96 227 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CMKLR1Q99788 373 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 CARS2Q9HA77 564 aaKnown RBP11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 TAS2R14Q9NYV8 317 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 B4GALT6Q9UBX8 382 aa11.24□□□□□ -0.61
PRKCSH-220ENST00000593104 TRBV23OR9-2A0A075B6M9 112 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 IGHV5-10-1A0A0J9YXX1 117 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 DFFAO00273 331 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 PALMO75781 387 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ECEL1O95672 775 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 FGF1P05230 155 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 FGF3P11487 239 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 CSF2RBP32927 897 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 GNPDA1P46926 289 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 SCNN1BP51168 640 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ZNF143P52747 638 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 KRT31Q15323 416 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 PNCKQ6P2M8 343 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 DNAJC24Q6P3W2 148 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 BRAT1Q6PJG6 821 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 DOK6Q6PKX4 331 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 DPPA4Q7L190 304 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ZNF677Q86XU0 584 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ARHGAP12Q8IWW6 846 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 C3orf20Q8ND61 904 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 KCTD15Q96SI1 283 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 CATSPERBQ9H7T0 1116 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 PCSK1NQ9UHG2 260 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 B3GALT1Q9Y5Z6 326 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 DOPEY2Q9Y3R5 2298 aa11.23□□□□□ -0.61
PRKCSH-220ENST00000593104 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TMX2-CTNND1H3BSU7 103 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TRAFD1O14545 582 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 ITGB2P05107 769 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 CEACAM5P06731 702 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 LIFP15018 202 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 ERCC5P28715 1186 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 CD1CP29017 333 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 GSCP56915 257 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 AGERQ15109 404 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 IGFBP7Q16270 282 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 CNGA3Q16281 694 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 HSD11B1LQ7Z5J1 315 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TRIM74Q86UV6 250 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 PIM3Q86V86 326 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 HEATR4Q86WZ0 1026 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 PHF13Q86YI8 300 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 OR6C4Q8NGE1 309 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 PDCD6IPQ8WUM4 868 aaKnown RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 ART4Q93070 314 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 NKD1Q969G9 470 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 ECHDC3Q96DC8 303 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 NUS1Q96E22 293 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 ZNF641Q96N77 438 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 CINPQ9BW66 212 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 SLC12A9Q9BXP2 914 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TRIM7Q9C029 511 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 EPN3Q9H201 632 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 RETREG1Q9H6L5 497 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 SP110Q9HB58 689 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 TMEM51Q9NW97 253 aa11.22□□□□□ -0.61
PRKCSH-220ENST00000593104 OCIAD1Q9NX40 245 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms