RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PRLP01236 227 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 IRF1P10914 325 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 CYTH1Q15438 398 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 TAF12Q16514 161 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 ACAD11Q709F0 780 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 ISCA2Q86U28 154 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 PIM3Q86V86 326 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 CDKN2AIPNLQ96HQ2 116 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 LBHD1Q9BQE6 289 aaPredicted RBP19.76■□□□□ 0.75
MBD3-209ENST00000592012 CYP4F12Q9HCS2 524 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 SSX2IPQ9Y2D8 614 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 SPO11Q9Y5K1 396 aa19.76■□□□□ 0.75
MBD3-209ENST00000592012 TMEM233B4DJY2 109 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CBX4O00257 560 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 HNRNPLP14866 589 aaKnown RBP eCLIP19.75■□□□□ 0.75
MBD3-209ENST00000592012 CD1EP15812 388 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 KCNC1P48547 511 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 PEX6Q13608 980 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 TRIM60Q495X7 471 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 C16orf59Q7L2K0 433 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 SHKBP1Q8TBC3 707 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 TOX2Q96NM4 488 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CDYLQ9Y232 598 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 ARIH1Q9Y4X5 557 aaPredicted RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 ZMPSTE24O75844 475 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 F11P03951 625 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 FDXRP22570 491 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 SLC34A1Q06495 639 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 ILF2Q12905 390 aaKnown RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 SH2D4BQ5SQS7 431 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 SPOUT1Q5T280 376 aaKnown RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 C6orf163Q5TEZ5 329 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CNKSR3Q6P9H4 555 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 PGM2L1Q6PCE3 622 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CPSF7Q8N684 471 aaKnown RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 DTX3LQ8TDB6 740 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 ACTRT2Q8TDY3 377 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 RSRC1Q96IZ7 334 aaKnown RBP19.75■□□□□ 0.75
MBD3-209ENST00000592012 CCDC28BQ9BUN5 200 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 ZNF385DQ9H6B1 395 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CATSPERZQ9NTU4 200 aa19.75■□□□□ 0.75
MBD3-209ENST00000592012 CRTAMO95727 393 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 CCL5P13501 91 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 ITGAXP20702 1163 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 MNX1P50219 401 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 ZNF140P52738 457 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 PLK1P53350 603 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 BTKQ06187 659 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 CCDC6Q16204 474 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 PDCD2Q16342 344 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 C1orf146Q5VVC0 180 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 DNAJB7Q7Z6W7 309 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 TMEM150AQ86TG1 271 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 TOP1MTQ969P6 601 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 RMDN1Q96DB5 314 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 RTKNQ9BST9 563 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 TDRD1Q9BXT4 1180 aaKnown RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 ALG9Q9H6U8 611 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 SCUBE2Q9NQ36 999 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 NLE1Q9NVX2 485 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 STOML2Q9UJZ1 356 aa19.74■□□□□ 0.75
MBD3-209ENST00000592012 CORO1CQ9ULV4 474 aaPredicted RBP19.74■□□□□ 0.75
MBD3-209ENST00000592012 PDHA1P08559 390 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 OGNP20774 298 aaKnown RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 SP100P23497 879 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 SESN3P58005 492 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 RNF219Q5W0B1 726 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 TMCO2Q7Z6W1 182 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 SLC39A11Q8N1S5 342 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 MDGA1Q8NFP4 955 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 PHF21BQ96EK2 531 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 TMEM169Q96HH4 297 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 MAELQ96JY0 434 aaKnown RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 ARHGAP26Q9UNA1 814 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 RGSL1A5PLK6 1076 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 CCNT2O60583 730 aaKnown RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 CD160O95971 181 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 SLC4A1P02730 911 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 CES1P23141 567 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 PIK3R1P27986 724 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 PPP3CCP48454 512 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 STC1P52823 247 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 ARF5P84085 180 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 TWF1Q12792 350 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 CUL3Q13618 768 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 RAB33AQ14088 237 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 TYSND1Q2T9J0 566 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 TMEM198Q66K66 360 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 SDCCAG8Q86SQ7 713 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 MYLK4Q86YV6 388 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 SLC22A9Q8IVM8 553 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 NRG4Q8WWG1 115 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 ZNF689Q96CS4 500 aaPredicted RBP19.73■□□□□ 0.75
MBD3-209ENST00000592012 CYP2S1Q96SQ9 504 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 MUC3BQ9H195 1237 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 SMPD4Q9NXE4 827 aa19.73■□□□□ 0.75
MBD3-209ENST00000592012 SLC22A2O15244 555 aa19.72■□□□□ 0.75
MBD3-209ENST00000592012 C1RP00736 705 aa19.72■□□□□ 0.75
MBD3-209ENST00000592012 PRSS56P0CW18 603 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms