RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 LHCGRP22888 699 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 DYNLT1P63172 113 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 NIPAL4Q0D2K0 466 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 NFATC4Q14934 902 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 SMAD1Q15797 465 aaKnown RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 HS1BP3Q53T59 392 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 DHRS13Q6UX07 377 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 CCNI2Q6ZMN8 369 aaPredicted RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 SPOCD1Q6ZMY3 1216 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 USP45Q70EL2 814 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 TMEM139Q8IV31 216 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 PHACTR4Q8IZ21 702 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 CALR3Q96L12 384 aaKnown RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 BAG1Q99933 345 aaPredicted RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 TDRD1Q9BXT4 1180 aaKnown RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 OR1A2Q9Y585 309 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 BTNL10A8MVZ5 291 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 K7ESM1 405 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 PPP1R12AO14974 1030 aaPredicted RBP27.29■■□□□ 1.96
SMAD4-213ENST00000591914 AQP9O43315 295 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 CYP2A6P11509 494 aaPredicted RBP27.29■■□□□ 1.96
SMAD4-213ENST00000591914 ACP1P24666 158 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 ZBTB17Q13105 803 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 ILKQ13418 452 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 ACOX1Q15067 660 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 DAAM2Q86T65 1068 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 RBFAQ8N0V3 343 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 GALNT15Q8N3T1 639 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 CNTD1Q8N815 330 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 DUSP23Q9BVJ7 150 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 BRD8Q9H0E9 1235 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 TCEAL2Q9H3H9 227 aaPredicted RBP27.29■■□□□ 1.96
SMAD4-213ENST00000591914 APOBEC3BQ9UH17 382 aaKnown RBP27.29■■□□□ 1.96
SMAD4-213ENST00000591914 DUSP10Q9Y6W6 482 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 PLXNB3Q9ULL4 1909 aa27.29■■□□□ 1.96
SMAD4-213ENST00000591914 PSMD11O00231 422 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 PROS1P07225 676 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 KRT10P13645 584 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 HTR1BP28222 390 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 MARCKSL1P49006 195 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 NR2C2P49116 596 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 PPARDQ03181 441 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 AP1B1Q10567 949 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 TFDP2Q14188 446 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 PTPRRQ15256 657 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 TFDP3Q5H9I0 405 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 ESRP1Q6NXG1 681 aaKnown RBP27.28■■□□□ 1.96
SMAD4-213ENST00000591914 FAM181AQ8N9Y4 354 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 KCTD5Q9NXV2 234 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 SPASTQ9UBP0 616 aa27.28■■□□□ 1.96
SMAD4-213ENST00000591914 ZRANB2O95218 330 aaKnown RBP eCLIP27.27■■□□□ 1.96
SMAD4-213ENST00000591914 PRLP01236 227 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 MMP2P08253 660 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 ALPIP09923 528 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 CTPS1P17812 591 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 CA4P22748 312 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 TRIM23P36406 574 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 FAXCQ5TGI0 409 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 HSD11B1LQ7Z5J1 315 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 TSPAN33Q86UF1 283 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 RCOR2Q8IZ40 523 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 NDUFAF2Q8N183 169 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 ACRBPQ8NEB7 543 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 LMX1AQ8TE12 382 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 KRT35Q92764 455 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 NUS1Q96E22 293 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 LRRC61Q9BV99 259 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 SLC13A1Q9BZW2 595 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 LACRTQ9GZZ8 138 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 CHKBQ9Y259 395 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.27■■□□□ 1.96
SMAD4-213ENST00000591914 LRP4O75096 1905 aa27.27■■□□□ 1.96
SMAD4-213ENST00000591914 A0A0J9YYE9 177 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 TPP1O14773 563 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 PJA2O43164 708 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 CST8O60676 142 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 GCATO75600 419 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 TRBC1P01850 177 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 HOXC4P09017 264 aaPredicted RBP27.26■■□□□ 1.95
SMAD4-213ENST00000591914 CKMT1AP12532 417 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 HNF1BP35680 557 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 VAV2P52735 878 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 HK3P52790 923 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 KIAA1024LP59773 190 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 RPL26P61254 145 aaKnown RBP27.26■■□□□ 1.95
SMAD4-213ENST00000591914 ALG11Q2TAA5 492 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 PRRT3Q5FWE3 981 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 PNCKQ6P2M8 343 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 PELI3Q8N2H9 469 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 ATL2Q8NHH9 583 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 EXD1Q8NHP7 514 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 FUBP1Q96AE4 644 aaKnown RBP27.26■■□□□ 1.95
SMAD4-213ENST00000591914 DTD2Q96FN9 168 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 APOLD1Q96LR9 279 aa27.26■■□□□ 1.95
SMAD4-213ENST00000591914 SAE1Q9UBE0 346 aaPredicted RBP27.26■■□□□ 1.95
SMAD4-213ENST00000591914 RPL26L1Q9UNX3 145 aaKnown RBP27.26■■□□□ 1.95
SMAD4-213ENST00000591914 USP24Q9UPU5 2620 aa27.25■■□□□ 1.95
SMAD4-213ENST00000591914 hCG_1818297A0A087WSY0 165 aa27.25■■□□□ 1.95
SMAD4-213ENST00000591914 LY6G6EA0A0G2JKS1 128 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms